Parus major (Great Tit): 107210129
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Entry
107210129 CDS
T04864
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107210129 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107210129 (MBD4)
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107210129 (MBD4)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
107210129 (MBD4)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107210129 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
107210129
NCBI-ProteinID:
XP_033373436
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All DBs
Position
12:complement(20062111..20065724)
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AA seq
559 aa
AA seq
DB search
GRSGAGFGPGLRGKNGVGLAPGSCVRPWPGPSCRPRSFPSSWTLPGLFFPCSPGGGGRGA
AAAARPGPSPSPSPGCRDRGPAGPSAVPRGWQRVSRRRRAGRTAGRIDVYFVSPEGKKLR
SKRALVEYLQKTGETTLKAADFDFTALQGSTCSGLRGYGTGDVRTDLEKEDCQSKVQELH
AENGAEIGIQNIQAGNGHLEDAASTVESTDLVMEGTISESLKTRRKGTDGKSVQTRKCGK
GSERRNQGDAKSKRQRRISNTWETECVQNKRGRRQTDTCGADSQGVGADPVDAGKTLSGV
SRAQLRSVAGSQRELGRLPEEGPCSSDTPAARSEEKSYGLETGKVPDPGDVAEQSVKCDT
EVDAEPWDGTSFTAVRMSPEESVPRTQVERRKTSPYFSSKYSKEAPSPPRRKALRKWTPP
RSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEVARAADWKEMSE
LLKPLGLYELRAKTIIRFSGEYLSKAWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDH
KLNVYHRWLWENRESLSID
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gggcggagcggggccgggttcgggcccggtttgcgcggcaagaacggcgtcggtctggcc
ccgggctcgtgtgtgcgtccgtggccaggcccgtcctgccgtccccggagcttccccagc
agctggaccttacccgggctcttcttcccctgcagccccgggggcggcggtcgaggcgcg
gcggcggcggcacggcccggccccagccccagccccagccccggctgccgggaccgcggc
ccggcggggcccagcgccgtcccgcgcgggtggcagcgggtgagcaggcgcaggcgggcg
ggcaggacggccgggaggatcgatgtgtacttcgtaagccctgaagggaagaagctgagg
tcaaaacgagcacttgtggagtatttacagaaaactggggagacaacactgaaagcagca
gattttgatttcacagctcttcaagggagcacatgctcagggttgaggggatatggcaca
ggagatgtgaggactgacctggaaaaggaggattgtcagagcaaagtgcaggagctccat
gcagagaatggtgctgagattggaattcagaacatccaggctgggaatggacacctggaa
gatgctgcatctactgtggaaagcacagacttagtaatggaaggcacaatctcagagagt
ttgaaaaccagaagaaaggggacagatgggaaaagtgtccaaactaggaaatgtgggaag
ggctcagaaaggaggaaccaaggtgatgccaagagcaagaggcagagaagaatctctaac
acatgggagacagaatgtgttcagaacaagaggggccgtagacagacagacacatgtgga
gctgacagccagggtgtgggtgctgaccctgtggatgcagggaaaactctgtcaggagtg
tccagggcacagctgaggtcagtggctggctcacagagggagctgggtcgcctgccagag
gaggggccctgctccagtgatacacctgctgcgaggtctgaggagaaatcctatggactg
gagacagggaaagtgccagatccgggggatgtggctgagcagagtgttaaatgtgacacc
gaggtggatgctgagccgtgggacgggacaagcttcacagcagtcagaatgtcaccagaa
gagtctgtcccgcgaacacaagtggagagaaggaaaacaagtccatatttttccagtaaa
tacagcaaagaagcccccagcccacccagaaggaaggccctcagaaaatggactcctcca
cgttctcctttcaatcttatccaggaaacactcttccatgatccatggaagcttctcatt
gccaccatatttcttaacaaaacctcagggaaaatggccattccagtgctctgggagttc
ctgaagaagtatccttctcctgaggtagccagagctgcagactggaaagagatgtcagag
ctgctcaaacctcttggtctctatgaactcagagccaaaaccatcatcaggttctcgggt
gagtacctgagcaaggcgtggcggtatcccatcgagctgcacggcattggcaagtacggc
aatgactcctacagaatcttctgtgtcaacgaatggaaggaggtgcagccacaggaccac
aagttgaatgtgtaccacaggtggctgtgggagaaccgggagagtctgagcatcgactga
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