Parus major (Great Tit): 107212972
Help
Entry
107212972 CDS
T04864
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmaj02000
]
107212972 (SLC6A4)
Transporters [BR:
pmaj02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107212972 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
107212972
NCBI-ProteinID:
XP_015502417
Ensembl:
ENSPMJG00000019668
LinkDB
All DBs
Position
19:complement(5964959..5986053)
Genome browser
AA seq
668 aa
AA seq
DB search
MEKKATSNETEPLTSKKDVSDCSKGEECKENGLLVRNPKSALRLAEEGNKVHPSQGDKGE
AAQISNGYSGVQSSGPCNGEVEDAQGMAPAATTTTTTTTSTTCGVEAQQQLMELEDRETW
SKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALGQY
HRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTAELPWTSCTN
PWNTGNCTNYFSKGNVSWSLHSTSPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLLLI
FTIVYFSIWKGVKTSGKVVWVTATFPYIILLILLVRGATLPGAWRGVLYYLKPDWQKLLN
TEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFTV
LGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAG
LEGVITGVLDEFPHVWGKRRELFVLGLTIICFLGSLATLTFGGAYVVKLFEEYATGPAVL
TVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPLFLLFVTCSFLSSPPE
LRLFDYDYPYWTTVVGYCIGTSSIIFIPIYMVYRLVVTPGTLKERILKSITPETATEIPF
GDIRMNAV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggccacaagcaatgagacagagccactgacttccaagaaagatgtctca
gactgtagcaaaggagaagaatgtaaagagaatggacttctggtcaggaaccctaaatct
gccctacggctggcagaggaaggcaacaaagtgcaccccagccagggggataagggggag
gcagctcagatctcaaatggttattcaggggttcagagctcaggtccctgcaatggagag
gtggaggatgcccagggcatggccccagcagccaccaccaccaccacaaccaccacatcc
accacctgcggggtcgaagctcagcagcagctgatggagctggaggacagggagacctgg
agtaaaaaaattgactttctcctctctgtcattggatatgcagtggatctgggaaatgtg
tggagatttccttatatctgctatcagaatggaggaggagcattcctcattccttacaca
atcatggccatctttggaggaattcctctcttctatatggaattagcactaggacagtac
cacaggaatggatgtatttccatttggagaaaaatatgtcctatattcaaaggaattggc
tttgccatctgtatcatagatctttacgtagcttcctactacaacaccatcatggcttgg
gctttttactacctcatctcctccttcacggcggagctgccctggaccagctgcacgaat
ccctggaacacaggaaactgcaccaactacttcagcaagggcaatgtcagctggtccctg
cactccacctctcctgcagaagaattttatacccgccaggttctgcaggtgcacagatcc
aatgggctggatgacctgggtggcatcagctggcaactgaccctctgcttgttgttaatc
ttcaccattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtggtttgg
gtgactgccacattcccttacatcatcctcctcatcctgctcgtgagaggggcaactttg
cctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaactcctgaac
actgaggtttgggtggatgcagcagctcagatttttttctccctgggaccaggttttggg
gtcctgttggcttatgccagctacaacaaattccacaacaactgttaccaagatgctctg
gtcaccagcaccgtgaactgcctgaccagctttgtgtccgggtttgtcatcttcaccgtg
ctgggatacatggctgagatgaggaatgaagatgtgtcagaggttgccaaagacactgga
cccagcctgctcttcatcacgtacgcagaggccattgcaaacatgccagcttccaccttc
tttgccatcatcttcttcctgatgctgctcacgctggggttggacagcacgtttgcagga
ctagagggagtgataactggagtcctggatgaattcccgcacgtctggggcaaacgcagg
gagctgtttgtccttggcctcaccatcatttgctttttggggtcgctggcaaccctgaca
tttggaggagcgtatgtggtgaagctgtttgaagaatacgccacgggtccagctgtcctg
accgtcgtgttcctagaggcagtggctgtgtcctggttctatggcatcacccagttttgc
aacgatgtgaaagaaatgctgggctctgccccaggctggtactggcgagtttgctgggtt
gcaattagtcccctcttccttctgttcgtcacctgcagctttctgtccagccctcctgag
ctgaggctctttgattacgattatccctactggaccacagttgtgggttactgcatagga
acctcctccatcatcttcattcccatctacatggtctatcgcttggttgtcaccccaggg
acacttaaggagcgtattctgaaaagcattactccagaaacagctacagaaattcccttt
ggagacatccgcatgaacgcagtataa
DBGET
integrated database retrieval system
