Parus major (Great Tit): 107213727
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Entry
107213727 CDS
T04864
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X2
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04120
Ubiquitin mediated proteolysis
pmaj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107213727 (UBE4B)
04120 Ubiquitin mediated proteolysis
107213727 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107213727 (UBE4B)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107213727 (UBE4B)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
U-box type E3
107213727 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
107213727
NCBI-ProteinID:
XP_015503955
Ensembl:
ENSPMJG00000014827
LinkDB
All DBs
Position
21:7126831..7163158
Genome browser
AA seq
1309 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGSSSQPSTPLTSPQRETPPGPPGAAPAPGPSHSLGLSVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
NSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPD
RSLILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTNFTSYVPMTGSSLTPPASSV
ATPAVAPISVSSQLPAASPSWTHPCSPRYRPYTVAHAGGSAASAAPRSLGISIPSSSPGP
PAMAAGPPAIPVITSRHRPPAMGPPLFTASPGALRRRPSLQSRIPPSVGGSGSSSVSDSC
SDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVL
QGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASK
ECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLWLPKSLSTGAGRELQRLSYLG
AFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHYLELARQELFKILHSILLNGD
TREAALGYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIF
HPRCRIELPTDETRVKATMEEVAAWIAELYRDPSPFSEPKFPTECFFLTLHAHHLSILPS
CRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADA
GLLDENFLRRCLNFYGMVIQLMLRILDPAYPNVKLPLTPEVPKVFASLPEFYVEDVAEFL
FFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKF
FEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGT
FMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQAR
QSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPK
CRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRK
AGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTI
MDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDKQNDH
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggacgagatccgtcggaggcgcctggcacggctggcaggaggc
tcctcgtcccagcccagcaccccgctgacgtccccgcagagagagacccctccggggccg
ccgggcgcagccccagcgccggggccctcgcacagcctgggcctcagcgtgcacagcatg
accccagctacctctcccatcggggcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttccctcagcagttctccatcaaacagccttgaaacccaatctcagtccctc
tctcggtctcagagcatggacattgatagtgtctcctgtgagaaaagtatgtcccaggta
gatgtggattcaggaattgagaacatggaggttgatgagaatgatcgcagagagaaacgg
agtctgacagacaaggagcctctgtcggggtcagaagtgtcagaggaacaagctctacag
ctggtctgtaagatcttcagagtctcctggaaggaccgagacagagatgttattttcctg
aattcactctctgcccagttcaagcagaacccaaaggaagtgttttcagattttaaggac
ttgattgggcagattttgatggaagtgctgatgatgtccacccaggcaagggatgagaac
ccctttgccagcctgacagccacctcccaacccattgctgcagctgcccgctctcctgac
agaagcctgatcttaaacatgggctccaaccctggaagcagccccatgttctgtaatgtg
ggctcctttggttccagctcgttatccagtctctatgggactagtccagctcctcctacc
aatttcacaagctatgtaccaatgactggttcatctcttaccccaccagccagttcagtt
gccaccccagcagtggctcccatttctgtcagctctcagctgccagcagccagcccctcg
tggacacatccttgctctccgcggtaccgcccttacaccgtggcccatgccggaggctct
gccgcttctgccgccccgcgctccttgggcatttccatcccatctagttctccaggtcct
ccagccatggctgctggccctccagccatcccagtcatcacatccagacacaggccccca
gccatgggtccacctttgtttactgcttcacccggtgccttgcgcaggcgtccttcctta
cagagcaggatccctcctagtgtgggaggctctggcagctcgagtgtttccgattcctgc
agtgaccacttcaccattgaaaactgtaaggagacagagatgctgaactacctcattgag
tgttttgacagagttggaatagaggagagaaaagcaccaaagatgtgtagccagccaaca
gttagccagttactgagcaacatccgatcccagtgcatttcacatgctgctttggtgcta
cagggatccttaacacaaccaaggtcattgcagcagcagtctttgctggtaccatatatg
ctgtgcaggaatctcccatttggcttcattcaagaactggtgagaacaacttaccaggat
gaagaggtgttcaaacagatctttattcccatcttacaaggcctggctgtggcttccaaa
gagtgctccctcgatagtgacaattttaaatatccccttatggcactatgtgaactctgt
gaaatcaagtttgggaaaacacaccccatgtgcagtttggttgtctctttgcccttgtgg
ttgcctaaatctttaagcacaggtgcaggaagagagctgcaaagactttcctaccttgga
gccttcttcagtctgtctgtctttgctgaagatgataacaaagtagttgaaaagtacttc
tcagggcctgccattactcttgagaacacccgggttgttagccagtctttgcaacattac
ctggaattagcaaggcaagagctgttcaagatcctgcacagtatcctgctgaacggggac
acccgggaggcagctctcggctacatggcagctgtggtcaatgccaacatgaagaaggcc
caaatgcagacagacgatcgtttggtgtctacagatggcttcatgctcaacttcctctgg
gtgctgcagcagctgagtacgaagataaagctggaaacggtcgatcccatgtacatattc
catcccaggtgtcgaattgagcttcccacagatgagacaagagtgaaagcaacaatggag
gaggttgcagcctggattgctgaactttacagggatccgtctccattttctgagccgaag
ttccccacggaatgtttcttcctcacgctgcacgcccatcacctctccatcctgcccagc
tgccgccgctacatccgcagactgcgcgccatcagggagctcaacaggactgttgaagat
ttaaagaacaatgaaagtcagtggaaggattctcctctggccaccagacatcgagagatg
ctgaaacgctgcaagacacagcttaagaaactggtgaggtgcaaggcttgtgcagatgct
ggtttgctggatgaaaacttcctcaggagatgcctgaatttctatggcatggtgatccag
ctgatgcttcgcattcttgaccctgcctatcccaatgtaaaattgcctttaactcctgag
gttccgaaagtatttgcatcattgccagagttttacgtggaagatgttgctgaattttta
ttttttattgtacaatatgctcctcaggtgctgtatgagccctgtactcaggacatagtg
atgttccttgttgtgatgctgtgcaaccagaactacatccgaaatccttatttagtagcc
aagctggtggaagtcatgttcatgacaaaccctgctgtccagccccggacacagaagttc
tttgaaatgattgagaatcaccctctctccactaaattgttagttccctccttgatgaag
ttttacacagatgtggaacataccggagccacgagcgagttctatgacaagtttacaatc
cgctaccacatcagcaccattttcaaaagcctctggcagaacatagctcaccatggtaca
tttatggaagagttcaactctgggaagcagtttgttcgctacatcaacatgctgataaat
gacacaactttcttgctggatgagagtctggagtccctaaaacgtatccatgaagtgcaa
gaggagatgaagaataaagagcaatgggacctgctgcccagggatcagcagcaggcccgg
cagtcacagctggctcaggatgagcgtgtgtcccgttcctatcttgccctggcaacagaa
actgttgatatgttccatatccttaccaagcaggtccaaaagccttttctcagacctgaa
cttggaccacggctggctgctatgttgaactttaacttacagcaactgtgtggccccaag
tgccgtgacctgaaagttgaaaacccagagaaatatgggtttgaaccaaagaagctgttg
gaccaactgactgacatttatctgcagctggattgtgctcgctttgctaaagcgattgct
gatgatcagaggtcctacagtaaagagctctttgaggaggttatctccaagatgaggaag
gctggaatcaagtctaccatagcaatagagaaattcaaactgctggcagagaaagtggag
gaaattgttgccaagaacgcccgtgcagagatcgattacagcgatgccccggatgaattc
agagatcccctgatggacactctgatgaccgaccccgtgcgcctgccctcgggaacgatc
atggacaggtccatcatcctgaggcacctgctcaactcctccactgaccctttcaaccgg
cagacgctgacagaaaacatgctggaaccagtgccagaacttaaagaacaaatccaagcc
tggatgagagacaagcagaatgaccattaa
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