Pseudomonas mandelii: OU5_5613
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Entry
OU5_5613 CDS
T03626
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pman
Pseudomonas mandelii
Pathway
pman03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OU5_5613 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pman03400
]
OU5_5613 (uvrB)
DNA repair and recombination proteins [BR:
pman03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OU5_5613 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OU5_5613 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHZ72692
UniProt:
A0A024EIP7
LinkDB
All DBs
Position
6206615..6208630
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AA seq
671 aa
AA seq
DB search
MSEFQLVTRFEPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMEFARATFRVRGDVIDIHPAESDFEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLGAVEGIKVELQERLDYLRTNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRESGQAPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEFESISPQTIFVSATPGNYEAEHAGRVVEQLVRPTGLVDPQ
IEIRPALTQVDDLLSEIGKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYEAELRSPGEIAKRIKALEEKMYALARDLEFEAAAQMRDE
IGKLRDRLITV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattccagctagtcacccgcttcgagcccgccggcgatcagccggaagccatc
cgcctgatggtcgagggcatcgaagccgggctggcgcaccagacgttgcttggtgtgacc
ggctcgggcaagaccttcagcatcgccaacgtgatcgcccaggtacagcgtccgaccttg
gtgctggcgccgaacaagaccctggccgcgcagttgtatggtgagttcaaggcgttcttc
ccgaacaatgccgtcgagtacttcgtttcctactacgactactaccagccagaagcctat
gtgccgtcatcggacaccttcatcgagaaagacgcctcgatcaacgaccacatcgagcag
atgcggctgtccgcgaccaaggcgctgctggaacgcaaggacgcgatcatcgtcaccacg
gtgtcttgcatctacggtttgggcagtccggaaacctatttgaaaatggtgctgcacgtg
gatcgcggcgacaagctcgatcaacgtgcgttgctgcgtcgcctggcagacttgcaatac
acccgcaatgacatggagttcgcccgggcgaccttccgggtgcgcggcgatgtgatcgac
atccacccggcggaatccgacttcgaagcgatccgcatcgagctgttcgatgacgaagtc
gagagcctgtcggctttcgatccgctgaccggcgaagtaatccgcaagttgccgcgattc
actttctacccgaaaagccactacgtgacgccacgggaaaccctgctgggtgccgtcgaa
gggatcaaggtcgaattgcaggagcgcctggattacctgcgcaccaacaacaaactggtg
gaagcccagcgcctggagcagcgcacccgtttcgacctggagatgatcctcgaactgggt
tactgcaacggtatcgaaaactactcgcgctacctgtcgggccgtgaatccggccaggcg
ccaccgaccctgttcgactacctgccggccgacgccttgctggtgatcgacgaatcccac
gtcagcgtgccgcaggtcggcgccatgtataagggcgaccgttcccgtaaagagacgctg
gtggaatacggcttccgcttgccgtcagcgctggataaccggccgatgcgtttcgacgaa
tttgaaagcatcagcccgcagacgattttcgtctcggccacgccgggcaattacgaagcg
gaacacgccggtcgcgtggtcgagcaactggttcgcccaaccggcctggtggacccgcag
atcgaaatccgcccggcgttgacccaagtcgacgacttgctctcggaaatcggtaaacgt
gtggcgctggaagagcgggtgctggtgactacgctgaccaagcgcatgtctgaagacttg
accgattacctggccgaccatggcgtgcgggtgcgttacctgcactcggacatcgacacc
gtggagcgggtcgaaatcatccgcgatctgcgtctgggcacgttcgatgtgctggtaggg
atcaacctgctgcgtgaaggcctggacatgccggaagtgtcgctggtggcgattctcgat
gcagacaaggaaggttttctgcgttccgagcgttcgttgatccagaccatcggccgggcc
gcgcgtaacctcaatggccgggcgattctgtatgcggatcgcatcaccggttccatggag
cgggcgatcggcgagaccgaacggcgtcgcgacaagcagatcgccttcaacctcgccaat
ggcatcacgccgaagggtgtgttcaaggacgtggccgacatcatggaaggcgccaccgtg
cccggttcgcgcagcaagaagcgcaaaggcatggccaaggctgccgaggaaagcgccaag
tacgaagccgaattgcgctcaccgggcgagatcgccaagcgcatcaaagcgctggaagag
aagatgtacgcgctggcgcgggatctggagtttgaagcggcggcgcagatgcgcgatgag
attggcaagctgcgggatcgattgattactgtctga
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integrated database retrieval system
