KEGG   Planococcus sp. Y42: B0X71_00025
Entry
B0X71_00025       CDS       T04763                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
pmar  Planococcus sp. Y42
Brite
KEGG Orthology (KO) [BR:pmar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmar03032]
    B0X71_00025
   03400 DNA repair and recombination proteins [BR:pmar03400]
    B0X71_00025
Enzymes [BR:pmar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B0X71_00025
DNA replication proteins [BR:pmar03032]
 Prokaryotic type
  DNA Topoisomerases
   B0X71_00025
DNA repair and recombination proteins [BR:pmar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B0X71_00025
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AQQ51682
UniProt: A0A1Q2KVI0
LinkDB
Position
4544..6472
AA seq 642 aa
MAMEESALQQTYDANQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEALAG
YCDEIKITIEKDNWIRVEDNGRGIPVSMHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG
LHGVGASVVNALSETTEVVVSRDGKKHRIIFRRGAVIEELNVIGETEASGTTVRFKADPE
IFTETTVYEYDILANRLRELAYLNRGLQIVIADEREGEEKENAYHYEGGISSYVEHLNRS
KDPLHEEPIFVEGEKEGVSVEVAMQYNGGYASTIYSFANNINTYEGGTHESGFKTALTRV
INDYARKNSMLKDAEPNLTGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVSQIVNHL
FSDGLERFLLENPSSARKVIEKGLMASRARLAAKKAREFTRRKSALEISSLPGKLADCSS
RDPEISEIYIVEGDSAGGSAKAGRDRHFQAILPLRGKIINVEKARLDKILSNAEIRAIIT
ALGTGIGDEFALEKARYHKVVIMTDADVDGAHIRTLLLTFLFRYMRPLIEAGYVYIAQPP
LYQIKQGKHIDYVYTDQQLQDALAQLPATPKPNIQRYKGLGEMNATQLWDTTMDPEYRTL
LQVALEDAMLADETFQMLMGDEVEPRRNFIESNASYVKNLDI
NT seq 1929 nt   +upstreamnt  +downstreamnt
atggcaatggaagaaagtgcattgcagcaaacgtatgatgctaatcagatccaagtgctg
gagggactcgaagcagtccggaaacggcctggtatgtatatcggttcgacaagttcgaga
ggcctccatcatttagtatgggaaattgtggataacagtatcgacgaagcactcgccggt
tattgcgatgagattaaaatcacgattgaaaaagataattggatccgtgtggaagataat
ggacgcggtattcctgtcagcatgcacgaaaagatgggccggccggctgtagaagtcatc
atgaccgtactgcacgcaggcggaaaattcggcggtggcggttataaagtatccggcggt
ctccatggtgtaggtgcttcggtcgttaacgcactttccgaaactacggaagtggttgtc
agccgagacggcaaaaagcaccgcatcatattcagacgcggtgctgtgatagaagaattg
aatgtaatcggcgagacagaagcaagcggaacgactgtccggttcaaagccgatccagaa
atattcacagagactaccgtatatgaatatgacattttggcaaatcgccttcgtgagctg
gcgtatctgaaccggggacttcaaatcgtcattgcggacgaacgggaaggcgaagaaaaa
gaaaatgcgtatcattacgaaggcggcatcagttcatatgtcgagcacctcaaccgttct
aaagatccgctccatgaagaaccgattttcgtggaaggtgaaaaagagggtgtatctgtt
gaagtggctatgcagtacaacggcggctacgcttcaacaatttattcatttgccaataac
atcaacacctatgaaggcggaacgcatgaatccggcttcaagacagctttgacccgggtt
attaatgattatgcccgtaaaaacagcatgttaaaggatgcggaaccaaacctgacaggt
gaggatgtgcgcgaaggactgactgcagtcatttcggttaaacatccagatccgcaattt
gaaggacagacaaaaacgaaactcggcaactcggaagtcagccaaattgtcaatcacctc
ttttcagatggtcttgagcgcttcctgcttgagaatccatcttctgcacgaaaagtcatt
gagaaagggctaatggcttcccgtgcccgtcttgctgcgaaaaaagcacgcgaatttaca
cggcgaaagtcagcgctcgaaatatcaagccttccgggtaaactcgctgattgttcatcg
cgcgatccggaaatctctgaaatctatattgtagaaggtgattccgcaggcggttcagct
aaagcaggacgtgatcgtcacttccaggcgattctgccgctgcgcggaaaaatcatcaat
gtggaaaaagcccgtcttgataaaatattgtcaaatgcggaaattcgtgcaatcatcaca
gcgcttggaactggcatcggtgatgaattcgcacttgaaaaagcacgctatcataaagtc
gtcatcatgacagatgcagatgtggatggtgcgcacatccgtaccttgctccttacattc
ctgttccgctacatgcggccgctgattgaagccgggtatgtttatatcgcacagccgcca
ctctatcagattaaacagggcaagcatattgattacgtctatacagatcagcaactgcag
gatgcactggcccagctgcctgcaacaccgaagccaaatatccagcgctacaagggccta
ggtgaaatgaatgctactcagctgtgggatacgacgatggatccggagtaccggacactt
ctccaggtcgcactggaagatgccatgctggcagatgaaacattccagatgctgatgggc
gatgaagtggagccgcgccggaactttattgaatcaaacgcaagttacgtgaaaaacctt
gatatttaa

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