Planococcus sp. Y42: B0X71_00025
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Entry
B0X71_00025 CDS
T04763
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pmar
Planococcus sp. Y42
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmar03032
]
B0X71_00025
03400 DNA repair and recombination proteins [BR:
pmar03400
]
B0X71_00025
Enzymes [BR:
pmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B0X71_00025
DNA replication proteins [BR:
pmar03032
]
Prokaryotic type
DNA Topoisomerases
B0X71_00025
DNA repair and recombination proteins [BR:
pmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B0X71_00025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AQQ51682
UniProt:
A0A1Q2KVI0
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Position
4544..6472
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AA seq
642 aa
AA seq
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MAMEESALQQTYDANQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEALAG
YCDEIKITIEKDNWIRVEDNGRGIPVSMHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG
LHGVGASVVNALSETTEVVVSRDGKKHRIIFRRGAVIEELNVIGETEASGTTVRFKADPE
IFTETTVYEYDILANRLRELAYLNRGLQIVIADEREGEEKENAYHYEGGISSYVEHLNRS
KDPLHEEPIFVEGEKEGVSVEVAMQYNGGYASTIYSFANNINTYEGGTHESGFKTALTRV
INDYARKNSMLKDAEPNLTGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVSQIVNHL
FSDGLERFLLENPSSARKVIEKGLMASRARLAAKKAREFTRRKSALEISSLPGKLADCSS
RDPEISEIYIVEGDSAGGSAKAGRDRHFQAILPLRGKIINVEKARLDKILSNAEIRAIIT
ALGTGIGDEFALEKARYHKVVIMTDADVDGAHIRTLLLTFLFRYMRPLIEAGYVYIAQPP
LYQIKQGKHIDYVYTDQQLQDALAQLPATPKPNIQRYKGLGEMNATQLWDTTMDPEYRTL
LQVALEDAMLADETFQMLMGDEVEPRRNFIESNASYVKNLDI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaagaaagtgcattgcagcaaacgtatgatgctaatcagatccaagtgctg
gagggactcgaagcagtccggaaacggcctggtatgtatatcggttcgacaagttcgaga
ggcctccatcatttagtatgggaaattgtggataacagtatcgacgaagcactcgccggt
tattgcgatgagattaaaatcacgattgaaaaagataattggatccgtgtggaagataat
ggacgcggtattcctgtcagcatgcacgaaaagatgggccggccggctgtagaagtcatc
atgaccgtactgcacgcaggcggaaaattcggcggtggcggttataaagtatccggcggt
ctccatggtgtaggtgcttcggtcgttaacgcactttccgaaactacggaagtggttgtc
agccgagacggcaaaaagcaccgcatcatattcagacgcggtgctgtgatagaagaattg
aatgtaatcggcgagacagaagcaagcggaacgactgtccggttcaaagccgatccagaa
atattcacagagactaccgtatatgaatatgacattttggcaaatcgccttcgtgagctg
gcgtatctgaaccggggacttcaaatcgtcattgcggacgaacgggaaggcgaagaaaaa
gaaaatgcgtatcattacgaaggcggcatcagttcatatgtcgagcacctcaaccgttct
aaagatccgctccatgaagaaccgattttcgtggaaggtgaaaaagagggtgtatctgtt
gaagtggctatgcagtacaacggcggctacgcttcaacaatttattcatttgccaataac
atcaacacctatgaaggcggaacgcatgaatccggcttcaagacagctttgacccgggtt
attaatgattatgcccgtaaaaacagcatgttaaaggatgcggaaccaaacctgacaggt
gaggatgtgcgcgaaggactgactgcagtcatttcggttaaacatccagatccgcaattt
gaaggacagacaaaaacgaaactcggcaactcggaagtcagccaaattgtcaatcacctc
ttttcagatggtcttgagcgcttcctgcttgagaatccatcttctgcacgaaaagtcatt
gagaaagggctaatggcttcccgtgcccgtcttgctgcgaaaaaagcacgcgaatttaca
cggcgaaagtcagcgctcgaaatatcaagccttccgggtaaactcgctgattgttcatcg
cgcgatccggaaatctctgaaatctatattgtagaaggtgattccgcaggcggttcagct
aaagcaggacgtgatcgtcacttccaggcgattctgccgctgcgcggaaaaatcatcaat
gtggaaaaagcccgtcttgataaaatattgtcaaatgcggaaattcgtgcaatcatcaca
gcgcttggaactggcatcggtgatgaattcgcacttgaaaaagcacgctatcataaagtc
gtcatcatgacagatgcagatgtggatggtgcgcacatccgtaccttgctccttacattc
ctgttccgctacatgcggccgctgattgaagccgggtatgtttatatcgcacagccgcca
ctctatcagattaaacagggcaagcatattgattacgtctatacagatcagcaactgcag
gatgcactggcccagctgcctgcaacaccgaagccaaatatccagcgctacaagggccta
ggtgaaatgaatgctactcagctgtgggatacgacgatggatccggagtaccggacactt
ctccaggtcgcactggaagatgccatgctggcagatgaaacattccagatgctgatgggc
gatgaagtggagccgcgccggaactttattgaatcaaacgcaagttacgtgaaaaacctt
gatatttaa
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