Paraglaciecola mesophila: FX988_01368
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Entry
FX988_01368 CDS
T06389
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pmes
Paraglaciecola mesophila
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmes03009
]
FX988_01368
Enzymes [BR:
pmes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FX988_01368
Ribosome biogenesis [BR:
pmes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FX988_01368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
NepR
Motif
Other DBs
NCBI-ProteinID:
QHJ11140
UniProt:
A0A857JJ04
LinkDB
All DBs
Position
complement(1581891..1582874)
Genome browser
AA seq
327 aa
AA seq
DB search
MSTSYEKIQLQAVVPQTLLGKRLDQALAEMFPDYSRSRIKDWILADQVSIDGQIVNKPRE
KLLGEELIEIDASIEIQERHSAQEIDLNIVYEDEHILVINKPTNLVVHPGAGNANGTILN
ALLSHVPDIASVPRAGIVHRLDKDTTGLMVVAKTIPAQTHLVEKLQAREISREYEAVVYG
NLIAGGSVDEPIGRHPTKRTNMAVVQSGKPALTHYRVKHKYRAHTHLRLKLESGRTHQIR
VHMAHLRHPLVGDQAYGGRPRLPKAASEVMIETIRGFKRQALHAIQLELEHPITGEWMSF
QAPLPDDFVNLLDVLKEDTAQNPDDLV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccagctatgaaaaaatacaactacaggccgtggtgccgcaaacgttattaggt
aaacgtttggatcaagctttggctgaaatgttccctgattattcacgatctcgtataaaa
gattggattttggcagatcaagtctcgatagatggtcagatagtgaacaaaccaagagaa
aagctactgggtgaagagttaattgaaatcgatgccagcatcgaaatacaggagcgccac
agtgcgcaggaaatcgatttaaacattgtctatgaagatgagcatatcttggtaatcaat
aagccaacaaatttggtggtgcatcctggggcgggtaatgccaatggcaccattttaaat
gccttgctcagtcatgtgcctgatatagcaagcgtgccgcgcgcaggtatcgtacaccgt
ttagataaagatacgaccggcttaatggtcgttgccaaaacaataccagcacaaacacac
ttagtcgaaaaactacaagctcgcgaaattagtcgggaatatgaagctgtggtgtatggt
aatttaattgccggaggcagtgtagatgaacccattggtcgtcaccctactaagcgcacc
aacatggcggttgtacaatctggaaagcccgcgttaacccattaccgagttaaacataaa
taccgcgcccacacccatcttcgtttgaaacttgagtctggccgtacccatcaaattcgt
gtgcatatggcgcatttgcgccaccccttggtaggagatcaagcctacggtggtcgtcca
cgtttacctaaagctgctagtgaggtgatgatagaaaccattcgtggttttaaacgtcag
gctttgcatgcgatccagcttgaacttgaacaccctattacaggtgagtggatgtcgttt
caggcaccattgcctgatgacttcgttaatttgctcgatgtgttaaaagaagacacggca
caaaatccagatgatcttgtttaa
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