KEGG   Pseudoxanthomonas mexicana: H4W19_12020
Entry
H4W19_12020       CDS       T06805                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pmex  Pseudoxanthomonas mexicana
Pathway
pmex03030  DNA replication
pmex03410  Base excision repair
pmex03420  Nucleotide excision repair
pmex03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H4W19_12020 (polA)
   03410 Base excision repair
    H4W19_12020 (polA)
   03420 Nucleotide excision repair
    H4W19_12020 (polA)
   03440 Homologous recombination
    H4W19_12020 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmex03032]
    H4W19_12020 (polA)
   03400 DNA repair and recombination proteins [BR:pmex03400]
    H4W19_12020 (polA)
Enzymes [BR:pmex01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H4W19_12020 (polA)
DNA replication proteins [BR:pmex03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     H4W19_12020 (polA)
DNA repair and recombination proteins [BR:pmex03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     H4W19_12020 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H4W19_12020 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: QND79092
UniProt: A0A7G6UJ95
LinkDB
Position
complement(2520295..2523057)
AA seq 920 aa
MTRLVLIDGSSYLFRAFHALPPLTNAQGEPTGALFGVVNMLRATLKEKPDYVAFVLDASG
PTFRDELYPDYKANRPPMPEDLRAQVEPMIRIVQALGFPLLRVEGVEADDVIGTLALQGA
AQGMEVTISTSDKDFAQLVRPGVALVNTMSGSRLDSADAVVEKFGVRPEQIVDFLALMGD
TVDNVPGVEKCGPKTAAKWLGEYGSLAAIMDRAGEIKGKIGDNLRAALPRLPLNRELVTI
KTDVALDGGPDTLPLRERHVDELRELYARYGFNQALKELEGGSPDASAVAEKEPGRARGT
GRIATTAPDEAVDPALGAAGEYTAVTTPEQLEALVAQLRAADEFAFDTETDSLDPMQANL
VGLSFATRTGQAVYVPVGHDYPGAPPQLDRAAVLAALSPVLSDAGRRKLGQHGKYDLHVL
RRHGVDVQGYADDTMLESFVLNSGSNRHDMDSLARRFLGYDTIKYEDVAGKGAKQIPFSQ
VAVDDATRYAAEDADITLRLHRVIAPRLAAEPGLERVYRDIEMPLVPVLARIEANGVMID
GDELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELKLPVLVKTPTGQPS
TNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQAGAATGR
LSSTDPNLQNIPIRTDDGRRIRKAFVAPPGRKLVACDYSQIELRIMAHLSQDPGLVRAFE
SGADIHKATAAEVFGRKLEEVTANERRAAKAINFGLMYGMSAFGLARQLGIGRGEAQDYI
ALYFSRYPGVRDYMERTRQQAREHGYVETVFGRRLYLEYINKGTQGQRAGAERAAINAPM
QGTAADIIKRAMIGVDAWLADHRNQALMILQVHDELVFEADAGFVPELLAEATSRMAAAA
QLSVPLVVDSGVGDNWEEAH
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgacacgactcgtactgatcgacggctccagctacctgttccgcgcattccatgcgctg
cccccgctcaccaacgcgcagggcgagccgaccggtgcgctgttcggcgtggtcaacatg
ctgcgcgccacgctgaaggaaaagccggactacgtggccttcgtgctggacgccagcggc
ccgaccttccgcgacgaactctatcccgactacaaggcgaaccggccgcccatgcccgag
gacctgcgcgcgcaggtcgaaccgatgatccgcatcgtgcaggcgctgggattcccgctg
ctgcgcgtggagggggtggaagccgacgacgtgatcggcacgctggcgctgcagggcgcg
gcacagggcatggaggtcaccatctccaccagcgacaaggatttcgcccagctggtgcgg
ccgggcgtggcgctggtcaacacgatgagcggcagccgtctggactccgccgacgccgtg
gtcgagaaattcggcgtgcgccccgagcagatcgtcgacttccttgccctgatgggcgac
acggtggacaacgtgcccggggtggagaagtgcgggcccaagacggccgccaagtggctg
ggcgaatacggctcgctggccgcgatcatggacagggccggcgagatcaagggcaagatc
ggcgacaacctgcgcgccgcgttgccgcgcctgccgctgaatcgcgagctggtcaccatc
aagacggacgtggcgctggacggcggtccggacacgctgccgttgcgcgaacgccatgtc
gacgagctgcgcgagctgtacgcacgttacggcttcaaccaggcgctgaaggaactggaa
ggcgggtcgcccgatgcatccgccgtggccgagaaggagccgggtcgcgcgcgcggtacc
ggacgcatcgccacgacggcgccggacgaagccgtcgacccggcgctgggcgctgccggc
gagtacaccgccgtgaccacgccggagcagctggaggcgctggtggcgcagttgcgcgcc
gcggacgagttcgccttcgacaccgagaccgacagcctggatccgatgcaggccaacctg
gtgggcctgagcttcgccacccggaccggccaggcggtgtacgtgccggtcgggcacgac
tacccgggtgcgccgccgcagctggatcgcgccgcggttctcgccgcgctgtccccggtg
ctgtccgacgcaggccgtcgcaagctgggccagcacggcaagtacgacctgcacgtgctg
cgccgccatggcgtggacgtgcagggctatgccgacgacacgatgctggagagcttcgtg
ctgaactccggcagcaaccgccacgacatggacagcctggccaggcgcttcctcggctac
gacaccatcaaatacgaagacgtggccggcaagggcgcgaagcagatcccgttctcgcag
gtggccgtcgacgacgccacccgctacgccgccgaggacgccgacatcaccctgcgcctg
caccgcgtgatcgcgccgaggctggcggcggagcctggcctggagcgcgtgtaccgcgac
atcgaaatgccgctggtgccggtgctggcccgcatcgaggccaacggcgtgatgatcgac
ggcgacgaactgcgccggcagagcgccgacctgtccaagcgcatgctcgcggcgcagcag
aaggccaccgagctggcgggccgcaccttcaacctggactcgcccaagcagctgcaggcc
ctgctgttcgacgaactgaagctgccggtgctggtgaagacgccgaccggccagcccagc
accaacgaggaggcgctggaagccatcgccgaccagcacgaactgccgcgggtgatcctg
gaataccgcggtctggccaagctgcgcagcacctacaccgacaagctgccggagatggtc
aatccggacaccggtcgcgtgcacaccagctaccaccaggccggcgcggcgaccgggcgg
ctgtcctcgaccgatcccaacctgcagaacatcccgatccgcaccgacgacgggcgccgg
atccgcaaggccttcgtggcaccgccaggccgcaagctggtggcctgcgactactcgcag
atcgagctgcgcatcatggcccacctgtcgcaggacccgggcctggtgcgcgcgttcgaa
tccggcgccgacatccacaaggcgacggcggcggaagtgttcggccgcaagctggaagag
gtcaccgccaacgaacgccgcgccgccaaggcgatcaacttcggcctgatgtacggcatg
agcgcgttcgggctggcgcgccagctggggatcgggcgtggcgaagcgcaggactacatc
gcgctgtacttcagccgttaccccggcgtgcgcgactacatggaacgcacgcgccagcag
gcgcgcgagcacggctatgtcgaaaccgtgttcggccgccgcctgtacctggagtacatc
aacaagggcacccaggggcagcgtgccggcgccgagcgcgcggcgatcaacgcgcccatg
cagggcacggcggcggacatcatcaagcgcgcgatgatcggcgtggatgcgtggcttgcg
gatcaccgcaaccaggcgctgatgatcctgcaggtgcacgacgaactggtgttcgaagcc
gacgccggtttcgtgccggaactgctggccgaagcgacttcacggatggccgccgccgcg
caactgagcgttccgctggtggtcgacagcggggtgggagacaactgggaagaggcccat
tga

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