Prochlorococcus marinus MIT 9303: P9303_21731
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Entry
P9303_21731 CDS
T00466
Symbol
recQ
Name
(GenBank) Superfamily II DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmf
Prochlorococcus marinus MIT 9303
Pathway
pmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P9303_21731 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmf03019
]
P9303_21731 (recQ)
03400 DNA repair and recombination proteins [BR:
pmf03400
]
P9303_21731 (recQ)
Enzymes [BR:
pmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P9303_21731 (recQ)
Messenger RNA biogenesis [BR:
pmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P9303_21731 (recQ)
DNA repair and recombination proteins [BR:
pmf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P9303_21731 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
SKI
Motif
Other DBs
NCBI-ProteinID:
ABM78908
UniProt:
A2CBP8
LinkDB
All DBs
Position
complement(1929506..1930999)
Genome browser
AA seq
497 aa
AA seq
DB search
MDPLIEALHHHYGWDGFRPGQRPVVEAILAGQDVLAVLPTGGGKSLCYQLPALLRDGLVV
VISPLVALMEDQVMQLQRRGISAACLHAGLDPSRRRDALVRLREERLRLLYLAPERLQGE
ATRQLIEDTAAQGKLVALAVDEAHCISAWGHDFRPDYRRLGQVRRLCPGVPVVALSATAA
PRVRADIIRLLALRRPLVQVCSARRNNLHYAMRRRSRDPLPDVLEALGKSRGASLIYART
RRSVEQWAERLQAADVAATPYHAGLDPEVRQQALADFLDQEKPVLVATVAFGMGVDRSDV
GLVLHLNLPATPEGYLQESGRAGRDGLPADCLVLFSPGDRTSLGWAMHASARRCADESAT
QEIQMRLELAQQQLRRIEAVAEGEFCLEQGLLLAVGELVPPCGRCDRCQQTARRRDWSEQ
AFAVLEVLEDSKGMNLRSLSESLSSTTGRKQERWGWLARRLVQEELITESNDGVQRLYLR
ESGRRFLRQPWPLHYAA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtggatccactgatcgaggccctgcaccatcactatggctgggatggtttcaggcctggt
caacgtcctgtggtggaagcgattcttgcgggtcaggatgttctggcggtgctgcccacc
ggtggtggtaaatcgctttgttatcagctgccagcgctgttgcgtgatggtctggtggtg
gtgatctctcccttggtggctttgatggaggatcaggtcatgcagctgcaacggcggggg
atttccgccgcttgtttgcatgctggcctggatccgtcgcgccgtcgcgatgcgctggtt
cgcctgcgagaagagcgcttgcgtttgctttatctggctcccgagcggttgcagggtgag
gccacgcggcaattgatcgaggacacagctgcgcagggaaagttggtggcactagctgtt
gatgaggcccattgcatcagtgcttggggccatgatttccggcctgattaccgtcgcctg
gggcaggtgcgccgtctctgcccaggtgtgcctgtggttgctctcagtgccactgcggct
ccaagggtgcgtgccgacatcatccgcctattggctcttcgtcggccgctggtgcaggtt
tgctcggcccggcgcaataatctccactacgccatgcggaggcgatcgagagatcccttg
cctgatgttcttgaggcgttagggaaatcaagaggggcgagtttgatctatgcccgaacg
cgtcgctctgtggagcaatgggcagagcggttgcaggcggcggatgttgcggctactcct
tatcacgccgggcttgacccggaggtgcgccagcaggcgctggctgatttcctagatcaa
gagaagcctgtgctggtggccacggtggcctttggcatgggtgtagatcgcagcgatgtg
ggattggttctgcatttgaatctgcctgcaacaccggagggctatttgcaggagtctggc
cgggccgggcgtgatggactgccggccgattgcttggtgttgttttctcctggtgatcgc
accagccttggttgggcgatgcatgcttcagctcgccgttgtgctgatgagagcgcgacg
caggagattcagatgcggttggagctggcgcagcaacagttgcggcgtatcgaggcggta
gcagaaggggagttttgcctggagcaagggctcttgcttgccgttggtgaattggtgccg
ccttgtggtcgttgcgatcgctgccagcagactgcccgccgccgtgattggtctgagcaa
gcctttgctgtgcttgaggtgctggaagatagcaagggcatgaatcttcgcagtctcagt
gaaagcctttcgtccactacaggccgcaagcaagaacgttggggttggttggctcgcagg
ttggtgcaggaagagctgattacggagagcaatgatggcgtccagcggctctatttacgt
gagagcggtcggcgctttttacgccaaccctggccgctgcactatgcggcctga
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