Proteus mirabilis BB2000: BB2000_0696
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Entry
BB2000_0696 CDS
T02789
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pmib
Proteus mirabilis BB2000
Pathway
pmib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BB2000_0696 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmib03019
]
BB2000_0696 (rhlE)
Enzymes [BR:
pmib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BB2000_0696 (rhlE)
Messenger RNA biogenesis [BR:
pmib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BB2000_0696 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGS59192
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All DBs
Position
787867..789261
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AA seq
464 aa
AA seq
DB search
MTDFTSLGLSEALLRAIDEQGYKTPTPIQQQAIEPILAGKDVLASAQTGTGKTAAFTLPI
LEKLATSAEKTKGRKPVKALILTPTRELAAQITDNVKAYSRYLPIRSLVVFGGVSINPQM
MKLRGGVDVLIATPGRLLDLEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPK
KRQNLLFSATFSKEITGLANSLLNNPISIAVAPKNSAAESVDQYVHLVDKKRKTELLSHL
IGLENWPQVLIFTRTKHGANKLAEHLNLDGIKSAAIHGNKSQGARTRALADFKDGKLKAL
VATDIAARGLDIDQLPYVVNFELPQVAEDYVHRIGRTGRAAATGKAISLVCVDEHGLLAD
IERLLKREIPRLALEGYDPDPSIKAAPLHKKPKNKARNKEGGHGRADMRGKDNRHTPRNK
NSRNQKESETGEIKPNKSKPARRSRKHDDDRDNQNPWSKARKEF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgattttacatcgcttggtttaagtgaggcgcttctccgcgctattgatgaacaa
gggtataaaaccccaacccctattcaacaacaggcgattgagccgattttggcgggtaag
gacgtattagcgagtgcacaaacgggtacgggaaaaacggccgcatttacattaccgata
ctggaaaaactcgctacatcagcagagaaaacgaaagggcgtaagccagttaaagcgctt
attttaacccctacacgtgaattagctgcacaaattaccgataacgtaaaagcttatagt
cgttatttacctattcgttcattggtggtttttggtggcgttagtatcaatcctcaaatg
atgaaattacgaggtggcgtcgatgttttgattgcaacaccgggccgcttacttgatctt
gaacatcaaaatgctgtcgacttatctcgcgttgaagtattggtgttagatgaagctgat
cgtatgttagatatgggatttattcatgatattcgtcgagtcatcaataagttaccgaaa
aaacgacaaaatttactcttttcagcgactttttcaaaagagataacagggcttgctaac
tcactactcaacaatcctataagtattgctgttgcccccaaaaactcagcggctgaatct
gttgatcaatatgtccatttagtggataaaaagcgtaagacagagctgttatcacactta
attggtctagaaaattggcctcaagttcttatttttactcgaactaaacatggtgcgaat
aaattagctgaacatcttaatttagatggcatcaaatcagcggcgatccacggtaataaa
agccaaggagctagaacacgtgctctagctgattttaaagacggtaaattaaaagcgtta
gttgccactgatattgcagcgcggggacttgatattgaccaacttccttatgtggtcaac
tttgaattaccgcaggtagcagaagattacgttcatcgtattggtcgaacagggcgtgcg
gcggcaacaggtaaagcaatatctttagtttgtgttgatgaacatggcttattagctgat
attgaacgcttattaaaacgtgaaattcctcgtttagcattagaaggttacgatcctgat
ccctcaataaaagcggcgcctttgcataaaaagccaaagaataaagcacgtaataaagag
ggcggacatggtcgtgctgatatgcgtggcaaagataatcgccatacaccacgtaataaa
aatagtcgtaatcaaaaagagagtgaaacgggtgagataaaaccgaataaatctaaaccc
gctagacgttcacgcaaacacgatgatgatcgtgataatcaaaatccttggtcaaaagct
agaaaagaattttga
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