KEGG   Proteus mirabilis BB2000: BB2000_3448Help
Entry
BB2000_3448       CDS       T02789                                 

Gene name
dacB
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase/endopeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
pmib  Proteus mirabilis BB2000
Pathway
pmib00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:pmib00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BB2000_3448 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases [BR:pmib01002]
    BB2000_3448 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmib01011]
    BB2000_3448 (dacB)
Enzymes [BR:pmib01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     BB2000_3448 (dacB)
   3.4.21  Serine endopeptidases
    3.4.21.-  
     BB2000_3448 (dacB)
Peptidases [BR:pmib01002]
 Serine Peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   BB2000_3448 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:pmib01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   BB2000_3448 (dacB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S13 Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID: AGS61868
LinkDB All DBs
Position
complement(3730538..3731980)
Genome map
AA seq 480 aa AA seqDB search
MRLLPIFRGIFYTLSLLSFSTLAIPVEKYIELLPDGTQVGLLTQTVGASSPNLTYNDNQL
SLPASTQKVVTALAALLQLGGDYQFTTTMETEGKIKNNQLEGDLIFRFSGDPTLTRQQLR
AMVAVLKQSGVTKITGNLLIDTSAFSSHDKAPGWVWNDMTQCFSAPPSAAIVDKNCFSVL
LQSGQKEGDIATIRKASFYPVTVLSEVETYEKGSTRTRFCELDVTVRDLNTYVITGCIPK
REEAMPLMFSIQDGAHWAGILLKEELQRADIELDGYVKRRSQPKAPVTVLAQTQSKPLHT
LLTTMLKESDNMIADAVFRTIGREYYGVAGTWRSGADATRAILKQKAGIDLANTIMVDGS
GLSRHNLIAPATMMQVLQYVGQHDSELNFISMLPLAGHDGTLQYRGGFTEAGVNGKVSAK
TGSLKGVYNLAGFMTTANGQKVAFVQFISAYSPPTQNRNAGRAYLVRFETNLYKDIYNNR
NT seq 1443 nt NT seq  +upstreamnt  +downstreamnt
atgcgcttattacctatattccgcggaatattttataccttgagtctgttaagcttttca
accctcgccattcctgttgaaaaatatatagaacttttgcctgatggcactcaagtcggt
ttactcacccaaactgttggcgcatcctcccctaacctaacttataatgataatcaatta
tctttgccagccagcacacaaaaagtggtcacagctttagccgccctattgcaattaggg
ggcgattatcaatttaccaccacaatggaaacggaaggtaagataaaaaacaatcaacta
gagggtgatttaattttccgttttagtggtgatcctacgctaactcgccagcaattacga
gcaatggttgccgtattaaaacaatccggcgtcacaaaaataacgggaaatttattaatt
gatacctctgctttctccagccatgacaaagcgccgggatgggtttggaatgatatgacc
caatgctttagtgccccaccaagtgccgctattgtagataaaaattgtttttccgtctta
ctgcaaagtggtcaaaaagaaggtgatatcgccaccatacgtaaagcgtctttttatcct
gtcacggttttaagcgaagttgaaacctatgaaaaaggctcaacacgaacccgcttttgc
gaattagacgtcacggtgagagatttaaatacttatgtgataacaggctgcattcctaaa
cgtgaagaagccatgccgctgatgttttccattcaagatggtgcgcactgggcaggtata
ctgctaaaagaagagttacaacgtgcagatattgagctggacggttatgtcaaacgccgc
tcccaacctaaagcccctgttactgttttagcacaaacacaatctaaaccgttacacact
ttattgacgacgatgttaaaagagtctgacaatatgattgcagatgccgtatttagaact
attggtcgtgaatattatggtgttgctggcacttggcgttcaggggcggatgccactcgt
gctattttaaaacaaaaagcgggcattgatttagctaatacaattatggtggatggatct
gggctttcccgccataacctgatagcccccgcaaccatgatgcaagtattacaatatgtc
ggacaacatgatagtgagttaaattttatcagtatgcttcctcttgccggtcatgatggt
acattgcaatatcgtggtggttttactgaagcgggcgtcaacggtaaagtttccgctaaa
acaggctcactcaagggagtgtataacctagctggctttatgacgacagccaatggacag
aaagtagcatttgtacaatttatttctgcctactctccccctacacaaaatcgcaatgct
ggacgcgcctatttggttcgttttgaaacgaatttatataaagatatctataacaataga
tag

DBGET integrated database retrieval system