Pseudomonas mendocina NK-01: MDS_0699
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Entry
MDS_0699 CDS
T01473
Name
(GenBank) ribosome-associated GTPase
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00730
Thiamine metabolism
pmk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MDS_0699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmk03009
]
MDS_0699
Enzymes [BR:
pmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
MDS_0699
Ribosome biogenesis [BR:
pmk03009
]
Prokaryotic type
GTPases
MDS_0699
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
FeoB_N
MMR_HSR1
AAA_16
Ras
nSTAND1
GTP_EFTU
AAA_29
ABC_tran
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
AEB56730
LinkDB
All DBs
Position
complement(760421..761452)
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AA seq
343 aa
AA seq
DB search
MAKRQLNRRQSWRIEKIQGERAARAAKRESRAVEALEGGDLGPEQTGLVIAHFGVQVEIE
GLQGELAGQVFRCHLRANLPSLVTGDQVVWRPGNQGDGVIVAQLPRNSELCRPDMRGQLK
PVAANVDQIVIVFAPLPEPHANLIDRYLVAAEHAGIRPLLLLNKADLIDEQNQVALDALL
KVYRQLEYPLLEVSAHQGDGMEQLKKRLDGHVSVFVGQSGVGKSSLVNGLLPGVDTRVGA
LSELTGKGTHTTTTARLFHFPGGGQLIDSPGIREFGLGHVSRDDVEAGFIEFHDLLGRCR
FRDCKHDREPGCALLQALEDGRVQPQRMASYRHIIASLPEDDY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacgccaactcaaccgccgccagagctggcgcatcgaaaagattcaaggcgag
cgcgccgcccgcgcggccaagcgcgaatcgcgagccgtggaagcactggaaggcggcgac
ctgggcccggagcagaccggcctggtgatcgctcattttggcgtacaggtggaaatcgaa
ggcctgcagggcgaattggccggccaggtgtttcgctgccacctgcgcgccaacctgccg
tcattggtcacgggtgatcaggtggtctggcgccccggcaaccagggcgacggcgtgatc
gtcgcgcagctgccgcgcaacagcgaactgtgccgccccgacatgcgcggtcagctcaag
ccggtggcggccaacgtcgaccagatcgtcatcgtcttcgcccccttgcccgaaccccac
gccaacctgatcgaccgctatctggtagccgccgagcatgccggcattcgcccgctgctg
ctgctgaacaaagccgacctgatcgacgaacagaaccaggtggcgctggacgccctgctc
aaggtctatcgacagctggagtatccactactggaagtctcggcccatcagggcgatggc
atggaacaactgaaaaagcgcctggatggccacgtcagcgtattcgtcggccagtccggg
gtcggcaaatcatccttggtcaacggcctgctgcctggtgtcgatacccgcgtcggcgcg
ctgtcggagctgaccggcaagggcacgcacaccaccaccaccgcgcggctgttccacttc
cccggtggcggtcagctgatcgactcacccggtatcagggaattcggcctgggccatgtc
agccgcgacgacgtggaggcaggcttcatcgaattccatgacctgctcggccgctgccgc
tttcgtgactgcaagcacgaccgcgagccaggctgcgcattgctgcaggccctggaggac
ggtcgcgtacagccacaacgcatggccagctaccggcacatcattgccagcctaccggaa
gacgattactga
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