Pseudomonas mendocina NK-01: MDS_2386
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Entry
MDS_2386 CDS
T01473
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MDS_2386
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmk01007
]
MDS_2386
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmk03016
]
MDS_2386
Enzymes [BR:
pmk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
MDS_2386
Amino acid related enzymes [BR:
pmk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
MDS_2386
Transfer RNA biogenesis [BR:
pmk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
MDS_2386
Prokaryotic type
MDS_2386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FapA
Motif
Other DBs
NCBI-ProteinID:
AEB58417
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Position
2610633..2611913
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AA seq
426 aa
AA seq
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MLDSKLVRTQLSEIAERLATRGFALDVARFEALESQRKSVQVRTEQLQAERNSRSKSIGQ
AKARGEDIAPLLAEVDQMGSDLEAGKRELDAIQNELDNLLLNIPNLPHESVPVGADEDGN
VEVARWGAPRTFDFEIKDHVALGEQHGWLDFETAAKLSGARFALLRGPIARLHRALAQFM
INLHTGEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIRREDQADLYLIPTAEVSLTN
IVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSFEA
LEGMTANAERVLQLLELPYRKLALCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNCGD
FQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPYMG
GIEVVG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattccaaacttgtccgcacgcaactctccgaaatcgccgagcgcctcgctacc
cgcggcttcgccctcgatgtcgctcgcttcgaggccctggagagtcagcgcaagtcggtg
caggtacgcaccgagcagctgcaggccgagcgcaacagccgttccaagtccatcggccag
gccaaggcgcgcggcgaagacatcgcgcccctgctggcggaagtcgatcagatgggcagc
gatctggaagcgggcaagcgtgagctggatgccatccagaacgagctggacaacctgctg
ctgaacatccccaacctgccgcacgagtcggtaccggtcggtgccgacgaagacggcaac
gtcgaggtggcgcgctggggcgccccgcgcaccttcgacttcgaaatcaaggaccatgtc
gccctcggcgagcagcatggctggctggacttcgaaaccgctgccaagctttccggcgcg
cgcttcgcgttgctacgcggccccattgcgcgtctgcatcgcgccctggcgcagttcatg
atcaacctgcacaccggtgagcacggctacgaagaggcctacaccccttatctggtgcag
gctccggcactgcagggcaccggtcagctgccgaagttcgaggaagacctgttcaagatc
cgccgtgaggaccaggccgatctgtacctgatcccgactgccgaagtctcgctgaccaat
atcgttgctggcgaaattctcgatgccaaacagctgccattgaagttcgtcgcacacaca
ccgtgcttccgcagtgaagcaggcgcttccggccgcgatacccgtggcatgatccgccag
caccaattcgacaaggtcgagatggtgcagatcgtcgagccctccaagtccttcgaggcg
ctggaaggcatgaccgccaacgccgagcgtgttctgcaactgctggaattgccgtatcgc
aagttggcgctgtgcaccggcgacatgggcttctctgcggtgaaaacctacgacctcgaa
gtctgggtgccgagccaggacaagtaccgcgagatttcctcctgttccaactgcggcgac
ttccaggcgcgccgcatgcaggcacgttaccgcaacccggaaaccggcaaacccgagctg
gtgcacacactcaacggttccggtctggcggttggtcgcaccctggtggcggtactggag
aactaccagcaggccgatggcagcatccgcgtccccgaagtgctcaaaccctacatgggc
ggcatcgaggtggtcggctaa
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