Pseudomonas mendocina NK-01: MDS_3137
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Entry
MDS_3137 CDS
T01473
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmk
Pseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmk03009
]
MDS_3137
Enzymes [BR:
pmk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MDS_3137
Ribosome biogenesis [BR:
pmk03009
]
Prokaryotic type
ribosomal protein modification factors
MDS_3137
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
AEB59168
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Position
3460760..3462082
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDAIGEALAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVNAVHEVIPPKTE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCETLSSMGVWVRLHYVYPY
PNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEPVPDDVKQERW
ERFMAHQQAISSARLQAKIGLEMDVLVDEVDGEGAVARSWADAPEIDGSVFIDSTSVKPG
DKVRVRIVDADEYDMWGELV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccaccccgaaagtcggattcgtcagccttggttgcccgaaagcaactgtc
gactccgaacgcatcctgacccaactgcgcatggaaggttacgagatcgtgccgacctac
caggatgccgacgtcgtggtggtcaacacctgtggcttcatcgacagcgccaaagccgag
tcgctcgacgccatcggcgaagccctggccgagaacggcaaggtgatcgtcaccggctgc
atgggcgtggccgaagacagcatccgcgacgtgcacccgagcgtgctggccgtcaccggc
ccgcaacaatacgagcaggtggtcaacgccgtacacgaggtcattccgccgaagaccgag
cacaacccgctgatcgacctggtgccgccgcagggcatcaaactcaccccgcgccactac
gcgtacctgaagatttctgaaggctgcaaccatacctgcagcttctgcatcatcccctcg
atgcgcggcaagctggtcagccgcccggtgggcgacgtgctcagcgaagccgagcgcctg
gtcaaggctggcgttaaggagctgctggtgatcagccaggacaccagcgcctacggcgtg
gacctgaagtacaagctggacttctggaacggccagccggtgaagacgcgcatgctggaa
ctgtgcgagacgctctcctccatgggcgtatgggtgcgcctgcactacgtctacccctac
cccaacgtcgacgacgtgatcccgctgatggccgccggcaagctgctgccgtacctggat
atccccttccagcacgccagcccgaaagtgctcaagtcgatgaagcgtccggccttcgaa
gacaagactctggcgcgcatcaagaagtggcgcgagatctgcccggagctgaccatccgc
tccactttcatcgtcggcttccctggcgagaccgaggaagacttccagtacctgctggac
tggctgaccgaggcacagctcgaccgcgtcggctgcttccaatactcgccggtagaaggt
gcaccggccaacgatctgggcctcgagccggtgccggatgacgtcaagcaggagcgctgg
gagcgcttcatggcgcaccagcaggccatcagctcagcgcgcctgcaggccaagatcggc
ctggagatggatgtgctggtcgacgaagtggacggcgaaggcgcggtcgcccgctcctgg
gccgacgccccggaaatcgacggcagcgtgttcatcgactccaccagcgtcaagcccggc
gacaaggtacgcgtgcgcatcgtcgatgcggacgagtacgacatgtggggcgaactggtc
tga
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