Pseudomonas mendocina NK-01: MDS_3489
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Entry
MDS_3489 CDS
T01473
Name
(GenBank) diguanylate cyclase/phosphodiesterase
Organism
pmk
Pseudomonas mendocina NK-01
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
MHYT
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AEB59520
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Position
3851371..3853467
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AA seq
698 aa
AA seq
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MALSYVIASVGSLSTLTIARHLDQVQRRSMRLVWGLLGGLCLAGAIWSMHFIGMLAFQAP
VAIRYDLAITILSLLVALAAALLALYYMAMPRPGLSRQLLAAVIIGLGISAMHYSGMAAI
RSPAQAYYHSGLFTLSIAIAISASFAALLLNRYVRHGSQKRQRWMMVSAALVMGAAIASM
HYTGMAALNLVVPEGTPLQLRSADNSVQLVLIVASITLLILSLSLAAAWIGRKLDDKERD
LQRVNTLLVQLDQAKASLEQVAHFDPLTELLNRRGFNRVFAATLEEHAVTGRTLAVMFLD
IDHFKRINDSLGHDAGDELLRVVAQRIRAALRERDIIARFGGDEFCVVASLDSNADPRGL
AARMLEQMKEPISLAGRKIVMTTSVGISLFPQDGSSADELLKHADLALYQSKGSGRNVVH
FFNPHLKQKASFELQLEEDLRQALLQDNGLVLYYQPIIDLRSGALSKLEALVRWNHPQHG
LLTPERFIAIAEANGFIDLLDNWVLRRACLDLNSLEQMGYPGLKIAVNCSALNLANDQLP
GRIEQLLNATRCPAHCLELEVTESALLSNINRAIGLLENIRALGVSLSIDDFGTGYSSLA
YLRRLPLDTLKVDRSFIQDVANSSQDREIVHAIIAMAHALHLKVVAEGVETTAQLAFLQE
RDCDQVQGYLFSKPVPLEEIVTLFPPHYRPLERVAARF
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtggccctctcgtacgtcatcgccagcgtcggcagcctgagcacgctgaccatcgcccgc
cacctggaccaggtgcaaagacgcagcatgcgtctggtctgggggctgcttggcgggctg
tgtctggcgggtgcgatctggtccatgcatttcatcggcatgctggcgttccaggccccc
gtcgccattcgctacgacctcgccatcaccattctgtcgctgctggtggcgctggctgct
gccctcctggctctctactacatggccatgccgcgtcccggcctgagccgccagttgctg
gcggccgtgatcatcggcctgggcatcagcgccatgcactacagcggcatggccgcgatc
cgctccccggcacaggcttactaccacagcggcctgtttaccctgtccatcgccattgcc
atcagcgccagcttcgccgcgctgttgctcaaccgctacgtacgccatggctcgcagaag
cgccaacgctggatgatggtttccgcggcgctggtgatgggcgccgcgatcgcctccatg
cactacaccggcatggctgcactcaatctggtggtgccggaaggcacgccgctgcaactg
cgcagcgccgacaacagtgtgcagctggtactgatcgtcgcctccatcaccctgctcatc
ctcagcctgagcctggcagcggcctggatcggtagaaagctcgatgacaaggagcgcgac
ctgcaacgggtcaataccctcctggtacagctcgaccaggccaaggcctcgctggaacag
gtggcgcatttcgacccactgaccgagttgctgaaccgccgtggattcaatcgggtattc
gccgccacgctggaagaacacgcggtgaccgggcgcaccctggcggtgatgtttctcgat
atcgaccacttcaagcgcatcaatgacagccttggccacgatgccggtgacgagctgctg
cgtgtcgtcgcgcagcgcattcgcgcggcactgcgtgaacgcgacatcatcgcgcgcttt
ggcggcgacgagttctgcgtggtcgccagcctcgacagcaacgctgacccgcgcgggctg
gctgcacgcatgctcgaacagatgaaggaaccgatcagcctggccggccgcaagatcgtg
atgaccaccagcgtcggcatcagcctgttcccgcaggacggcagcagcgccgatgagttg
ctcaagcatgccgacctggcgctctatcagtccaaaggcagcgggcgcaacgtggtgcat
ttcttcaatccgcacctgaagcagaaagcctcgttcgagctgcaactggaagaagatctg
cgccaagccctgctgcaggacaacggcctggttctctactaccagccgatcatcgacctg
cgcagcggtgccctgagcaagctggaggctctggtgcgctggaatcatccacagcacggt
ctgctcaccccggaacgcttcatcgccatcgccgaggccaacggcttcatcgacctgctc
gacaactgggtgctgcgccgtgcctgcctcgatctcaacagcctggaacagatggggtat
ccggggttgaagatcgcggtcaactgctcggcgctcaacctcgccaatgaccagttgccg
ggccgcatcgaacaactgctgaacgcgacccgctgccccgctcactgcctggagctggag
gttaccgaaagcgcgctgctgagcaacatcaaccgcgcgatcggcctgctggaaaacatc
cgcgcgctgggggtgagcctgtccatcgacgatttcggcaccggttattcatccctcgcc
tatctgcgtcgcttgccactggatacgctgaaggtggaccgctccttcatacaggatgtg
gccaactccagtcaggaccgcgagatcgtccacgccatcatcgccatggcccatgccctg
catctgaaagtcgtcgccgaaggcgtggagaccactgcgcagctggcgttcctgcaggag
cgcgattgcgatcaggtgcagggttacctgttcagcaaaccggtaccgctggaggaaatc
gtgaccctctttccgccgcactaccggccgctggaacgggtggcggcaaggttttga
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