Pseudomonas mendocina NK-01: MDS_4219
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Entry
MDS_4219 CDS
T01473
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MDS_4219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmk03400
]
MDS_4219
Enzymes [BR:
pmk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MDS_4219
DNA repair and recombination proteins [BR:
pmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MDS_4219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
V-SNARE
Motif
Other DBs
NCBI-ProteinID:
AEB60250
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All DBs
Position
4630430..4630672
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AA seq
80 aa
AA seq
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MARKKAAPDFEHSLAELQTLVERMESGELSLEDSLTAFEQGIGLTRECQAALAQAEQKVQ
ILLERDGELQPAPFDTDETA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagccgcccccgacttcgaacactccctcgccgagttacaaactctg
gtcgagcgcatggagagcggcgagctgtcgctggaagattcactgaccgccttcgagcag
ggcatcggcctcacccgcgaatgccaggccgcgctggctcaggccgagcaaaaggtgcag
atcctgctggagcgcgatggtgagttgcagcccgcccccttcgatacggacgaaacggca
tga
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