Candidatus Phytoplasma mali: ATP_00052
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Entry
ATP_00052 CDS
T00729
Symbol
rnc
Name
(GenBank) DsRNA-specific ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pml
Candidatus Phytoplasma mali
Brite
KEGG Orthology (KO) [BR:
pml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pml03019
]
ATP_00052 (rnc)
03009 Ribosome biogenesis [BR:
pml03009
]
ATP_00052 (rnc)
03036 Chromosome and associated proteins [BR:
pml03036
]
ATP_00052 (rnc)
Enzymes [BR:
pml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ATP_00052 (rnc)
Messenger RNA biogenesis [BR:
pml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ATP_00052 (rnc)
Ribosome biogenesis [BR:
pml03009
]
Eukaryotic type
90S particles
RNase
ATP_00052 (rnc)
Prokaryotic type
rRNA processing factors
ATP_00052 (rnc)
Chromosome and associated proteins [BR:
pml03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ATP_00052 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
NtrY_N
Motif
Other DBs
NCBI-ProteinID:
CAP18239
UniProt:
B3R075
LinkDB
All DBs
Position
complement(64779..65456)
Genome browser
AA seq
225 aa
AA seq
DB search
MLSTLIKKLKIKPKQISLYKMSITHSSYANENKLKKKDNERLEFLGDAVINLLMADYLYT
KKEKENEGFMSKKRAQSVCEDSLVIYAKSIQLQNYILLGKGEKNKNINNSILANAFEALF
GAIYLDLGYYIAKKVFILIVIPRLSNIIDNIDFKTQLQELVQSQKKTISYYITEEKGLDH
SKEFTAEVFLEKKNVGRGFGKTKKSAEQDAARYVLNILSKGEKND
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgacactaattaaaaaattaaaaattaaacccaagcaaatatctttatataaa
atgtctattactcatagttcttatgcaaatgaaaataaattaaagaaaaaagacaatgaa
aggttagaatttctaggtgacgctgttattaatcttttgatggcggattatttatataca
aaaaaagaaaaagaaaacgaaggttttatgagtaaaaaaagagctcaatctgtttgtgaa
gattctttagttatttacgctaaaagtattcaacttcaaaattatattttacttggtaaa
ggagaaaaaaataaaaatattaataactctattttagccaatgcctttgaagctttattt
ggtgctatttatttagatttaggttattatatagctaaaaaggtatttattttgattgta
attcctcgcttatccaatattattgataatattgattttaaaactcaattacaagaatta
gttcaaagtcaaaaaaaaacaattagttattatatcactgaagaaaaaggattggatcat
tctaaagaattcacagcagaagtttttttagaaaaaaaaaatgttggacgtggttttgga
aaaactaaaaaatccgctgaacaagatgcagctagatatgttttgaatatcttgtctaaa
ggagaaaaaaatgattaa
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integrated database retrieval system
