Pseudomonas soli: O165_015945
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Entry
O165_015945 CDS
T03276
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmos
Pseudomonas soli
Pathway
pmos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O165_015945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmos03019
]
O165_015945
03400 DNA repair and recombination proteins [BR:
pmos03400
]
O165_015945
Enzymes [BR:
pmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O165_015945
Messenger RNA biogenesis [BR:
pmos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O165_015945
DNA repair and recombination proteins [BR:
pmos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O165_015945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
Sigma70_r4_2
ResIII
HTH_23
HTH_28
GerE
Motif
Other DBs
NCBI-ProteinID:
AIN59693
UniProt:
A0AA86F8R6
LinkDB
All DBs
Position
complement(3353225..3355372)
Genome browser
AA seq
715 aa
AA seq
DB search
MLEQAQRVLKDVFGYDSFRGRQAAIIECVAGGGDALVLMPTGGGKSLCFQVPGLLRPGLT
VVVSPLIALMDDQVATLDELGVAAAALNSTLSAEQQRDLAGRLRRGEVKMLYLAPERLVQ
PRMLDFLRGLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT
REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKK
VDETAAFLCDQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK
LDAMLALCEETRCRRQSLLAYFDEVLEQPCGHCDNCVDNVQTWDATEPARQALSAVFRTG
QRYGVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKTLAEAEWRSLFRQLVARGLVDIDLE
GYGGLRLSDSCRPLLRGEVNLQLRRDLKPQTVAKASGGSGGSPASQLVRAEERELWEALR
TLRRKLAEEHSVPPYVIFPDSTLLEMLRSMPTSLSDMAQVSGVGARKLERYGQAFLEVLN
GSGGTEEAPKVVLDLRHELVSLARAGMTPAQIAGQLNCTEKNVYSLLAEAIGRQELSLEQ
ALDLPEELMMEVQDAFLDGEGELPPVSAVAPLFGQRVPEGVLHCVRAALAVEFGV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcgtcctcaaggatgtcttcggttacgatagtttccgcggg
cgccaggcagcgatcatcgaatgtgtggcgggcggtggcgacgcgctggtactgatgccc
actggtggcggcaagtccctgtgcttccaggtgcccggcttgctgcgccccggcttgacg
gtggtggtgtcgccgctgatcgcgctgatggacgaccaggtcgccaccctcgacgagctg
ggcgtggccgccgctgcgctgaactccacgctcagcgccgagcagcagcgcgacctggcc
gggcgcctgcgccgcggcgaggtgaagatgctgtacctggctcctgagcgcctggtgcag
ccgcgcatgctggacttcctgcgcggcctggacatttccctgttcgccatcgacgaggcc
cactgcgtctcgcaatggggccacgacttccgccccgagtacctgcaactgggccagctc
gccgagctgttcccccatgtgccgcgtatcgccctgaccgccaccgccgacatgcgcacc
cgcgaggagatcgtccagcgcctgcacctgcagggcgccgagcgtttcctgtcgagcttc
gaccggccgaacatcttctaccgcatcgtgcccaaggaggcgccgcgcaagcagttgatg
gcgttcctcggcgagcggcgcggcaacgccggcatcgtctattgcctgtcgcgcaagaag
gtcgacgagaccgcggccttcctttgcgaccagggcttcccggcgctgccgtaccacgcc
ggcctggctgcggagacccgcgccgccaaccagcaccgcttcctcaacgaggaagggctg
atcatggtcgccacgattgccttcggcatgggcatcgacaagcccaacgtgcgcttcgtt
gcccacctcgacctgcccaagtcgctcgaggcctattaccaggagaccggccgtgccggc
cgtgacggcctgccgtcggacgcctggatggcctacggcctgcaggacatggtgatgctc
aagcagatgctgcagaactccgagggcgacgagcgccacaagcgcatcgagcagcacaag
ctcgacgccatgctggccctctgcgaggaaacccgttgccgccgccagtcgttgctggcc
tatttcgacgaggtgctggagcagccctgcgggcactgcgacaactgtgtcgacaacgtg
cagacctgggacgccaccgagcccgcgcgccaggccttgtcggcggtgttccgcaccggc
cagcgctatggtgtcggccatctggtcgatgtgctattgggcaaggacaccgagaaggta
cgcaatttcggccacgagaagctgtcggtgttcggcgtcggcaagacgctggccgaggcc
gagtggcgctcgctgttccgccagttggtggcgcgcgggctggtggacatcgacctggaa
ggctacggcggcctgcgcctgtccgatagctgccggccgctgctgcgcggtgaggtgaac
ctgcaactgcgccgcgacctcaagccgcagaccgtggccaaggcgtccggcggtagtggc
ggcagcccggccagccagctggtgcgcgccgaggagcgcgaactgtgggaggcgttgcgc
accttgcggcgcaagctggccgaagagcacagcgtgccgccttatgtcatcttccccgac
tccactttgctggagatgttgcgcagcatgcccaccagcctcagcgacatggcccaggtc
agtggcgtcggcgcgcgcaagctggagcgctacggccaggccttcctcgaggtcctcaat
ggctccggtggcaccgaggaagcgccgaaggtggtgctcgacctgcgtcacgaactggtc
agcctggcccgcgccggcatgacgccggcgcagatcgccgggcagctcaactgcaccgag
aagaacgtctacagcttgctggccgaggccatcggccgccaggagctgagcctggagcag
gcgctggacctgcccgaagagctgatgatggaagtacaggatgccttcctcgacggcgag
ggcgagctgccgccggtgtcagctgtggcgccgctgttcggccagcgggtgcccgaaggt
gtgctgcactgcgtgcgggcggcgctggcggtggagttcggcgtgtga
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integrated database retrieval system
