Paenibacillus mucilaginosus 3016: PM3016_1929
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Entry
PM3016_1929 CDS
T01757
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03030
DNA replication
pmq03430
Mismatch repair
pmq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PM3016_1929
03430 Mismatch repair
PM3016_1929
03440 Homologous recombination
PM3016_1929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmq03032
]
PM3016_1929
03400 DNA repair and recombination proteins [BR:
pmq03400
]
PM3016_1929
Enzymes [BR:
pmq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PM3016_1929
DNA replication proteins [BR:
pmq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PM3016_1929
DNA repair and recombination proteins [BR:
pmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PM3016_1929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
SpoVR
Motif
Other DBs
NCBI-ProteinID:
AFC28833
UniProt:
H6NJ71
LinkDB
All DBs
Position
2161334..2162071
Genome browser
AA seq
245 aa
AA seq
DB search
MKDMRPAGRMWHLYKMGGLTPALTSMFDVQSAQQMAFIRSIMKEQRKNSLYEIPLDTVEL
VVFDLETTGFSPYNGDEIISFGAVTVTGRTLSEKDTFYSLVNPKRAIPREIEELTGITNE
MVADAPDLLHALRGFLEFVQQKVLVAHGSGHDKHFLNSALWKTSKVNLSHRLLDTMMIAK
WLNPRLPAFDLDSLLNLYGIEVTVRHHALEDAVMTAKLWSMLMLEVESRGIHTLGELYTH
LSHTN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatatgagacccgctgggcggatgtggcatctgtacaagatgggcggattaacg
ccggcccttacgtccatgtttgatgtgcagagtgcacagcagatggccttcatccgctcg
atcatgaaggagcagcgcaagaattccttgtatgagattccattggatacggtggagctg
gtagtctttgatctcgaaacgaccggcttctcgccctacaacggagacgaaatcatctcc
ttcggggcggtgacggtgaccggacgcacgttatcggagaaggataccttctattccctt
gtcaatccgaagcgcgctattccccgggaaattgaggagctgaccgggattacgaacgag
atggtggcggatgcgccggatcttctgcatgcgctgcgaggcttcctggagttcgtgcag
cagaaggtgctcgtagcccatggatcgggtcatgacaaacattttctgaattccgcgctg
tggaaaacctcgaaagtcaatttgtcgcaccggctgctcgatacgatgatgatcgccaaa
tggctgaatcccaggcttcccgcattcgatttggattcgctgctgaatctgtacgggatt
gaagtgacggtccggcatcatgctctggaggatgcggtgatgacggccaaattatggagc
atgctcatgctggaggtggaatccaggggcattcatacgcttggcgaattatatacgcat
ttaagccatacgaattga
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