Paenibacillus mucilaginosus 3016: PM3016_2937
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Entry
PM3016_2937 CDS
T01757
Name
(GenBank) BfmBC
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq00010
Glycolysis / Gluconeogenesis
pmq00020
Citrate cycle (TCA cycle)
pmq00260
Glycine, serine and threonine metabolism
pmq00280
Valine, leucine and isoleucine degradation
pmq00310
Lysine degradation
pmq00380
Tryptophan metabolism
pmq00620
Pyruvate metabolism
pmq00630
Glyoxylate and dicarboxylate metabolism
pmq00640
Propanoate metabolism
pmq00785
Lipoic acid metabolism
pmq01100
Metabolic pathways
pmq01110
Biosynthesis of secondary metabolites
pmq01120
Microbial metabolism in diverse environments
pmq01200
Carbon metabolism
pmq01210
2-Oxocarboxylic acid metabolism
pmq01240
Biosynthesis of cofactors
Module
pmq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmq_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pmq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PM3016_2937
00020 Citrate cycle (TCA cycle)
PM3016_2937
00620 Pyruvate metabolism
PM3016_2937
00630 Glyoxylate and dicarboxylate metabolism
PM3016_2937
00640 Propanoate metabolism
PM3016_2937
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PM3016_2937
00280 Valine, leucine and isoleucine degradation
PM3016_2937
00310 Lysine degradation
PM3016_2937
00380 Tryptophan metabolism
PM3016_2937
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PM3016_2937
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmq04147
]
PM3016_2937
Enzymes [BR:
pmq01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PM3016_2937
Exosome [BR:
pmq04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PM3016_2937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Pyr_redox_dim
AlaDh_PNT_C
FAD_oxidored
GIDA
DAO
FAD_binding_2
3HCDH_N
NAD_binding_8
HI0933_like
2-Hacid_dh_C
FAD_binding_3
Thi4
Motif
Other DBs
NCBI-ProteinID:
AFC29807
UniProt:
H6NME1
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All DBs
Position
3381891..3383360
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AA seq
489 aa
AA seq
DB search
MSQNFDVVVLGGGVGGYSAAIRAAQLGKSVAIVEEDKLGGTCLHRGCIPSKALLRSAEVY
ALMKESARFGIETGETRLNFPQVLSRKNEVVESLHTGLQFLMRKHKIQVFYGKGRVIGPS
IFSPRSGAVSVEQADGEILSLVPEALILATGSRPRVLPGLEPDGVTVLSSDDALRMEELP
ASMLIIGGGVIGVEWASMLSDFGVKVTIAEVGPRLVPGEEEEISRELERLLRKRGVTIHT
GCTVLPETCRKQEGGLSIEAEQRGERIRLEAGAALVSVGRGANVEGIGLENTDVKIEGGY
IRVNASMQTAEHHIYAVGDCTGGVQLAHAAGHEGIAAAEHICRQETHRYEPHRIPRCVYS
RPEIASVGWTEAQAKERGHEVKTSKVHFQALGKALVLGETDGFVKVVADARTNDILRGPY
DRCACDRLYLGGRAGAAARSRTVGSGNGDASAPDAVGDSWRSDARGGRKSHHDVAAGAER
PRPGKMNYL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaattttgacgtggtggtgctcggaggcggggtaggcggctattctgcagcg
atccgggcagcgcagcttggcaagtccgtggccattgtggaagaagacaagctcgggggg
acatgtctgcaccggggatgcatcccgagcaaggcgcttctccgaagtgctgaagtatat
gctttaatgaaggaaagcgcacgtttcgggatcgaaaccggggagacgagactgaacttc
ccccaggtgctgagccgcaagaatgaagtggtggaaagcctgcataccggtctgcagttt
ctgatgcgcaagcacaagattcaggtcttctacggcaaaggccgtgtcatcgggccgtcg
atcttctcgccgcgcagcggggccgtatccgttgagcaggcggacggggagattctctcg
ctcgtgccggaggcgctgattctggcgaccggatcgcgtccgcgcgtgctgccgggtctc
gagcccgacggcgtgacggttctcagcagcgacgatgcgctgcggatggaagagctgccg
gcgtcgatgctcatcatcggcggaggggtgatcggggtcgagtgggcctcgatgctcagc
gacttcggcgtgaaggtgacgatcgccgaggtggggccgagactcgtgcccggcgaagaa
gaggaaatctcccgggagctcgagcgtctccttcgcaagcgcggggtgaccatccatacc
ggctgcacggtgctgccggaaacctgccgcaaacaggaaggcgggctgtcgatcgaagcg
gagcagcgcggagagcgcatcagacttgaagccggggcggcgcttgtcagcgtagggcgc
ggggcgaatgtggaaggaatcggcctcgagaatacggacgtgaagatcgagggcgggtat
atccgggtgaacgcctcgatgcagacggcggagcaccatatctatgccgtgggcgactgc
acgggaggcgtgcagctggcgcatgccgcaggccatgaaggcatcgcagccgcagaacat
atctgccgtcaggagacgcaccgctatgaaccgcaccggattccgagatgcgtgtattcg
cgtccggagatcgcctcggtcggctggacggaggcccaggccaaggagcgcggccacgag
gtcaagacgtccaaggtccactttcaggcgctgggcaaggcgctggtgctgggcgagacg
gacggattcgtgaaggtggttgcagatgcccgcacgaacgatatcctcaggggtccatat
gatcggtgcgcatgtgaccgactatatctcggaggccgtgctggcgcagctgctcgaagc
cgcaccgtgggaagtgggaacggcgatgcatccgcacccgacgctgtcggagattcttgg
cgaagcgatgctcgcggtggacggaagagccatcacgatgtagccgcgggcgccgaacga
ccccgccccgggaagatgaattacttatga
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