Paenibacillus mucilaginosus 3016: PM3016_7444
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Entry
PM3016_7444 CDS
T01757
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
pmq
Paenibacillus mucilaginosus 3016
Pathway
pmq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PM3016_7444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmq03019
]
PM3016_7444
Messenger RNA biogenesis [BR:
pmq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PM3016_7444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
AAA_19
AAA_22
rpo132
Motif
Other DBs
NCBI-ProteinID:
AFC34010
UniProt:
H6NIW0
LinkDB
All DBs
Position
complement(8697710..8698978)
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AA seq
422 aa
AA seq
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MTFQQLQLIPPIIKALAKENYTQPTPIQEQAIPPVLAGRDLFGCAQTGTGKTAAFLLPII
QLLSTQQGRPNGKRVIRSLILTPTRELAIQISDNAKAYGCFTNLRYGVIVGGVSQRPQEQ
LLEQGMDILIATPGRLIDLMNQGFVDLSHVQILVLDEADRMLDMGFIHDMKRIIAKLPVK
RQTLFFSATMPPEITSLVNSLLKNPVKIEITPVSSTAERIKQMLYYVDKPNKLLLLIDLL
QDKSIASALVFTRTKHGADRVVRGLTKAKITAQAIHGDKSQNARQAALNNFKSGATRLLV
ATDIAARGIDIEELSHVINYNLPNIPETYVHRIGRTGRAGLSGIAISFCENEEIPYLKDI
EKLTKQKIPVVTDHPYPMTMTEPVPATVGADRANGAPSKDGARGHSGKSGGGRRRRRPHA
GK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgacattccaacaattacagttgattccccctattattaaagcgctggccaaggaaaat
tatacgcagcctacgcctattcaggagcaggcaatcccgccggtgctggcgggccgtgac
ttgttcggctgcgcccagacggggaccggcaagacagcagcattcctgctgccgatcatt
cagctgctgagcacacagcaggggcgcccgaacggcaagcgcgtcattcgttcgctgatc
ctgacgcctacgcgtgagttggctattcagatttccgacaacgccaaagcttacggatgc
ttcacgaatctgcgctatggtgtgatcgtgggcggcgtctcgcagaggcctcaggagcag
ctgctggagcagggcatggacattctgattgcgacaccgggtcggctgatcgacctgatg
aatcaagggttcgtcgacctgagtcacgtgcagattctggtgttggacgaagccgatcgg
atgctcgacatggggttcattcatgatatgaagcggatcattgccaagctgccggtcaag
cggcagacgttattcttctctgcgacgatgccgcccgagatcacgtccctggtaaactct
ttgctgaagaatccggtgaaaatagagattacccctgtttcctcaacggcggagagaatt
aagcagatgctctactatgtggacaagccgaataaactgctgctgctgattgatctgctg
caggacaagtcgatcgcaagtgcgctcgtgttcacccgtacgaagcacggcgcggaccgg
gtggtgcgcggcttgacgaaggcgaagattacggcgcaggccattcatggcgacaagtcg
cagaatgcccgccaagcagcgctgaataacttcaagagcggtgcgacccgcttgctggtg
gcgacggacatcgcggcacggggcatcgacattgaagaactgtcgcacgtgattaactat
aatttgccgaatattccggagacgtatgtccatcggatcggccgtaccggacgtgcgggc
ttaagcgggattgcgatttcgttctgcgagaacgaggagattccctatctgaaggatatc
gagaagctgacgaagcagaaaatcccagtagttacagatcatccttacccgatgacgatg
acggagccggtaccggcgacggtgggggcggacagagccaatggtgcaccatccaaggac
ggtgctcgcggacacagcggcaaatccggcggcggccgccgcagacggcgaccccatgct
ggaaagtaa
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