Podarcis muralis (common wall lizard): 114596976
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Entry
114596976 CDS
T06059
Symbol
ERCC6
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
114596976 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmua03036
]
114596976 (ERCC6)
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114596976 (ERCC6)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
114596976 (ERCC6)
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
114596976 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Helicase_C_2
Plexin_cytopl
Spt5-NGN
DUF3450
Motif
Other DBs
NCBI-GeneID:
114596976
NCBI-ProteinID:
XP_028584730
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All DBs
Position
5:complement(10606973..10663785)
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AA seq
1462 aa
AA seq
DB search
MPAEKHQPEGGNHVSVGSDSGNTGLMEAEQRGALPPSEGHMGDHLEALALESKLPAVAGT
SSGALRKGPLLLIDRQQIQSVARGAQADELRDLEVDVYDQDVLEQGVLQQVDNAINEANK
AVQIADAEKEYQSVLDDLRSCTTSLKQIATIIEQFTPQAATNKDISRKLDSVKRQKYNKE
QQLKKIKAKQRRLQIILGEEISGEIDGVDFEEDVEPGPSSLGSMLMPAQETEWENLIRTG
QMTPFGTKILQSQEKKPRRIMLDEGAGFEKYLADQAKLSFERKRPSVRKGTKRKAPSQKN
LIKTPVRPIKGKGAESKSRPKTDSRLKKHMRKLQNHVLKIQAKARLPKGSEIQGEEQQED
SEGSEYRPDEEELGSLDGEDEFFREDDGDDYEVKPLPRRKRFSLTHEFQEDVGDDDFFPS
SEEEEDDIAGKRRIKKCRDDGNEDYYKQRLRRWHKQQLKDREERQKAGEDSDDSDAEFAE
GFRVPGFLFKKLFKYQQTGVGWLWELHCQQVGGILGDEMGLGKTIQIIAFLAGLSYSKIR
TRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTNKKVKLIQEIV
ACSGILITSYSYIRMLQDNIHGYGWHYVILDEGHKIRNPNAAVTVACKQFCTPHRIILSG
SPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACILR
DTINPYLLRRMKADVKMSLSLPEKNEQVLFCRLTDEQHQVYKTFIDSKEVYQILNGDMQI
FSGLVALRKICNHPDLFSGGPKILKGVPDEELKEEDHFGFWKRSGKMIVVESLLKIWHKQ
GHRVLLFTQSRQMLHILEAFLKQRSYSYLKMDGTTTVASRQPLIARFNEDESLFVFLLTT
RVGGLGINLTGADRVIIYDPDWNPSTDTQARERAWRIGQMREVTVYRLLTAGTIEEKIYH
RQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDGAQGTETSAIFAGTGSDVPTPKW
QLKRKAVNLAGASKRRHRLAGRTSPTSTRLPDSFSERQRVSSPSASTEPDETGKHNTEVS
PRICSPPQSDAWMTAAAPTDPLSGVEEKPLGSGDEGAQLEKKEAPENVGCLDSFPVGDTS
VFVESRRDLVHEKNSHCQAQDGNEEPENNCSKHTSKNKHHKHRPRKRKRSRDARFEGQRI
PHLVKQRKYQKEDSEEEKHPKKVEDYVLEKLFKKSGIHSVMKHDAIMEASSPDYVLVEAE
ANRVAQDALRVLKISRQRYQGATSAGFPARTKSRFGQKRNPTLVTESTSSPSPGKKCKDL
EKRREENKSRNISPAHFDGRVEAGESSSNAMDSSSLLAKMRERNHLTVPQTTDSQTEENL
PQGAAAPSVATEHQELLMDVRNFLAFQARVPGQASTQEILQEFESKLTVEQSXVFRELLR
NLCTFYRRPSGEGLWNLKPEFT
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgaaaaacatcagcccgaaggagggaatcatgtttctgttgggagtgattca
ggtaatacaggactaatggaagctgaacaaagaggtgctttgcctcctagtgaaggtcac
atgggagaccatctggaagctcttgccttggaaagcaagctacctgcagtagcaggcacg
tcttctggagcactgagaaagggaccgctgctgctcattgacaggcagcaaatccagtct
gtggcacgtggtgctcaggcagatgaactcagagacctggaagttgatgtgtatgaccag
gatgtattggaacaaggagttcttcagcaggtagacaatgcaataaatgaagcaaacaag
gcggtgcaaattgctgatgcagaaaaagaataccagtctgtactggatgacttgaggtca
tgcacaacatccttgaaacaaatcgctacaattattgagcaatttactccacaagctgcc
actaataaagatattagtagaaaactagattctgtgaagcggcaaaaatacaacaaggag
cagcagttgaaaaaaatcaaagcaaagcaacgacgccttcaaataattcttggagaagaa
atttctggtgaaatagatggtgttgactttgaggaagatgtcgaacctggtccctcatcc
cttgggagcatgcttatgccagcccaggaaactgaatgggagaacctcatccgaactggt
cagatgactccatttggaacaaagatactccagagccaagagaagaagccccgtcggata
atgctagatgaaggagctggttttgaaaaatacttggcggatcaagcaaaactctcattt
gaaaggaagaggccttcagttcgtaaggggaccaagaggaaagctccttcgcagaagaat
ctgatcaaaactccagtacgtcccataaaaggcaaaggagccgagagtaaaagccggccc
aaaacggacagccgtttgaagaagcacatgagaaagcttcagaaccacgttcttaagatt
caggccaaggccagacttcctaagggcagtgagatacagggagaggagcaacaggaggac
agtgaggggtcggaatacaggcctgatgaagaagagcttggcagtctggatggggaagat
gaattttttcgagaagatgatggcgatgattacgaagtgaaacctctgccaaggagaaag
agattttcgttaacacacgaatttcaagaagatgttggggatgatgactttttcccaagc
tctgaggaagaggaggatgatattgctgggaaaaggagaattaaaaaatgtagagatgac
ggcaatgaagattactataagcaaaggttaaggaggtggcacaagcaacaactgaaagac
agagaggagcggcagaaggcgggggaagattcggatgatagcgatgctgaatttgctgag
ggttttagagttccaggtttccttttcaaaaaacttttcaagtaccagcagacaggtgtt
gggtggctctgggaattgcactgccagcaggtgggaggaattctgggagacgagatggga
ttgggcaagaccatccagataattgctttcttggcaggtctgagctacagcaagatcagg
acgcgtggttcaaattacaggttcgaagggctgggtccaacagtgattgtgtgcccaacc
acagtgatgcatcagtgggtgaaggagtttcatacttggtggcctccttttagagttgca
attctacatgacacgggctcttacaccaataaaaaggtaaaactgattcaggaaattgta
gcatgtagtggcattctgataacctcctactcttacattcgcatgctgcaagataacatc
catggttacggttggcattatgtgattctagatgagggacataaaattcggaatccaaat
gctgcagtcacggttgcttgcaaacagttctgcactcctcatcgaatcatcttgtctgga
tcacctatgcaaaacaacctaaaagagctgtggtccctctttgactttgtatttccagga
aaactaggaacacttcctgtcttcatggagcaattttctgttccaataaccatgggaggc
tattccaatgcttctccagttcaggtaaaaacagcatataagtgtgcttgcattttacgg
gacacaattaatccctatctgttgcggagaatgaaggcggatgttaaaatgagcctgtca
ctaccggagaaaaatgagcaggtactgttttgccgtttgacagatgagcagcaccaagta
tacaaaacgtttattgattccaaagaggtttatcagattctcaacggagacatgcagatt
ttctccggattggtggccctgagaaagatctgcaaccacccagacctcttttccggtggt
cctaaaattttgaagggtgtccctgatgaagaattgaaggaagaagaccattttggattc
tggaagcgttctgggaaaatgatagttgtagagtctctgctgaaaatatggcacaagcaa
ggccacagagtacttctctttactcagtctcggcagatgctgcacattctcgaagcgttt
ctaaagcagagaagctattcctatctcaagatggatggcaccacaacagtggcatcaagg
caaccccttattgcaagatttaatgaggacgaatccttatttgtattcctacttaccact
cgagtcggtgggcttggtattaacttgacgggtgcagacagagtgattatttatgacccc
gactggaatcccagcacagacactcaggctcgtgaacgtgcttggagaataggccaaatg
agagaagtaaccgtgtacagacttcttactgctggtactatcgaagaaaagatttaccac
agacaaatcttcaaacagtttctaacaaatagagtgttgaaggatccgaagcagaggcgc
ttcttcaaatcaaacgacctctatgaactctttacgttgagcagcccagatggggcacaa
gggaccgaaaccagcgctatatttgcaggcactggctctgatgttccaacacccaaatgg
cagttaaagcgtaaagctgtgaacttagctggcgcttctaagcgacggcaccgccttgca
gggcgtacatcgcccacaagcaccaggctgccagattccttctccgaaagacagcgtgta
agttcaccttctgcatcaacagaaccagatgaaacaggcaagcacaacacagaagtgtcg
cctcggatttgcagtcctccccaaagcgatgcttggatgacggcagctgctcctacagat
ccattgagcggagtggaagagaaacctttaggatcaggtgatgagggagcgcagttggag
aagaaagaagcgcccgagaatgtgggatgtttggattcctttcccgttggtgatacaagc
gtatttgttgaaagtcggcgtgatctcgtacatgagaaaaatagccattgccaggcgcag
gatgggaatgaggaaccggagaataattgcagcaagcacacctcgaaaaacaaacatcac
aagcacaggccacggaagaggaaacgttctcgggatgccagatttgagggtcagcggatt
cctcaccttgtgaagcagagaaagtaccaaaaggaggacagcgaggaagagaaacatccc
aagaaagtcgaggattatgttttggagaagcttttcaaaaaatcaggaatacacagtgta
atgaagcacgatgccattatggaagcctccagtccagattacgtgctggtggaagcagaa
gccaatcgtgttgctcaggatgccctcagagtgctgaagatctctcggcagcgataccag
ggagccacttctgctggttttccagcaagaacaaaaagcagatttggtcagaagaggaac
ccaaccttagtgacagagtctacctcctctccatctccaggaaagaaatgcaaggatctt
gagaaaaggagagaagagaataaaagcagaaatatttctcccgctcacttcgatggaagg
gtggaagcgggagagtcttcttcaaatgccatggactcatcatctctgctagctaaaatg
agggaaagaaaccatctgactgtaccccagacaactgacagtcaaacggaggagaatctc
ccacagggagcagccgcaccctctgtagctacagaacatcaggagttgctgatggacgtc
cgaaacttcttagctttccaggcccgggttcctggtcaagccagcactcaggaaatactg
caggagtttgaatcaaaactgactgtggaacagtctncggtctttcgagagctcctgaga
aacctctgcactttttataggaggccaagcggggaaggactctggaacttaaaaccagag
tttacctga
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