Podarcis muralis (common wall lizard): 114600173 Help Entry 114600173         CDS       T06059                                  Gene name TRAF6 Definition (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism pmua  Podarcis muralis (common wall lizard) Pathway pmua04010   MAPK signaling pathway pmua04120   Ubiquitin mediated proteolysis pmua04140   Autophagy - animal pmua04144   Endocytosis pmua04620   Toll-like receptor signaling pathway pmua04621   NOD-like receptor signaling pathway pmua04622   RIG-I-like receptor signaling pathway pmua05132   Salmonella infection pmua05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pmua00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     114600173 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     114600173 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     114600173 (TRAF6)    04140 Autophagy - animal     114600173 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     114600173 (TRAF6)    04621 NOD-like receptor signaling pathway     114600173 (TRAF6)    04622 RIG-I-like receptor signaling pathway     114600173 (TRAF6)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     114600173 (TRAF6)   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     114600173 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pmua04131]     114600173 (TRAF6)    04121 Ubiquitin system [BR:pmua04121]     114600173 (TRAF6) Enzymes [BR:pmua01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      114600173 (TRAF6) Membrane trafficking [BR:pmua04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     114600173 (TRAF6) Ubiquitin system [BR:pmua04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     114600173 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_2 zf-C3HC4_4 Med21 SlyX zf-TRAF_2 zf-RING_5 TRAF6_Z2 DUF4455 Cast zf-RING_11 Tropomyosin_1 U-box DUF16 UPF0242 TMF_DNA_bd MATH rRNA_proc-arch TMF_TATA_bd Spc7 Spc29 HMMR_N PspA_IM30 DUF1664 Cortex-I_coil Motif Other DBs NCBI-GeneID:  114600173 NCBI-ProteinID:  XP_028591838 LinkDB All DBs Position 7 AA seq 535 aa AA seqDB search MSLLHSNNSSFEASGQDSGCCAAMASCSIAGAKEKSINTSVSNGTGGTLSNSFMEEIQGY DVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPIDNEILLETQ LFPDNFAKREILSLTVKCPNKGCHQKMELRHLEDHELHCGFAPEKCPQCHAIFQKNQIQD HIKQECPRRQTSCPNCAVWMPYEEKEVHDQMCLLANVCCEYCNTVLIREQLPNHYDNDCP TAPVPCTYSPFGCPEKMQRNELARHMQEFTPVHMRMMAQTLLNITNFHGAIPYDPSPSCE CSPEVHNFKETIQQLEGRLVRQDHQIRELIAKMETQNNQMRDLKRTIRNLEEKVAEVESQ QCNGIFLWKIENFSVYLRAQEEDRPVVIHSPGFYTGKPGYKLCLRLHIQSPNAQRCANYI SLFVHTMQGQYDSHLPWPFQGTIRLSILDQSEGSSRHNHEEVMDTKPELLAFQRPMVDRN PKGFGYVTFMQLQALKQKNYIKDDSILVRCEVITRLDLNSLRREGFQPRSTDGAA NT seq 1608 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctacacagtaacaacagcagctttgaagccagtggtcaggatagcggctgc tgtgcagctatggccagctgttccattgctggagccaaagaaaaaagcatcaacaccagt gtcagcaatggcactgggggaacactttcaaactctttcatggaagaaatccagggctat gatgtggagtttgatcctccgctggaaagtaaatatgaatgcccaatctgtctgatggct ctccgggaagcagtgcagacaccatgcggacaccgtttctgcaaagcttgcattgtcaaa tccataagagatgctggtcataaatgtccaatcgacaacgaaattttactcgaaactcaa ctctttcctgacaactttgcaaaacgggaaatcctatcgctgacggtgaagtgtcccaac aagggctgtcatcagaagatggaactcaggcatttagaggaccatgagctgcattgcggc tttgctccagagaaatgtccccagtgccatgccattttccaaaagaatcagatacaggat catataaagcaagaatgtccacgacgacaaacctcctgtccaaactgtgctgtgtggatg ccttatgaagaaaaagaggttcatgaccagatgtgccttttagcaaatgtctgctgtgaa tactgcaatacagtgctaatcagagaacagcttcctaatcactacgataacgattgccca actgctccagtaccgtgtacatacagcccctttggatgtccagaaaaaatgcagagaaat gagttggcacggcatatgcaggagttcaccccagtccatatgagaatgatggctcagact ctcctgaatatcactaatttccatggcgctatcccatatgacccatcaccttcctgtgaa tgtagcccagaggtccacaacttcaaggagacgattcaacaactggaaggtcgcttggta aggcaagatcaccagatccgagaactcatagcaaagatggagacacaaaacaaccagatg agagatctcaaacgcactatccgaaatctggaggaaaaagtcgcagaagtggaatcacag cagtgtaatggtattttcctgtggaagattgagaatttcagtgtttacttgagagcgcag gaggaagataggcctgttgtaatccacagcccaggcttctacacagggaaacccggctac aaactctgcttgcggctgcatatccagtccccgaatgcacagcgctgtgccaactatatt tccctttttgttcatacgatgcaagggcaatatgacagccacctgccttggcccttccaa ggcaccatacggctttctatcctggatcagtcagaaggatcgtcaaggcacaaccacgag gaagtgatggataccaagcccgagctgcttgctttccagcgccccatggtcgaccgcaac ccaaaaggctttggatatgtgacgtttatgcagttgcaggcgctaaaacaaaaaaactat ataaaggacgatagtatcctagtgcgctgtgaggtcataacacgcttagacttaaacagt ctccgaagggagggttttcagcctcgtagtactgatggggcggcatag

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