Prunus mume (Japanese apricot): 103321180
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Entry
103321180 CDS
T03196
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103321180
Enzymes [BR:
pmum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
103321180
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103321180
Prokaryotic type
103321180
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
103321180
NCBI-ProteinID:
XP_008221186
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All DBs
Position
LG2:15070214..15072533
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AA seq
532 aa
AA seq
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MENPDTKTTISPPPQEPDPKKLKMSTTTTSDDDETTTMDTTKKQRYKRRKVAIFFAYCGV
GYQGMQKNPGAKTIEGDLEEALYLSNAVPEQDRNNPKRYDWARSARTDKGVSAVGQVVSG
RFYVDPPGFVDRLNSNISPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSAHRD
RESVLASLGSDKEFVKCLECSERGRKVGGLMGKRNYELRGTSFGLDISSNTNESMVESEF
NEETKVSPDNAGGDDSKSEPKNEISTSSNNNGVSGVEVEDSEDTDLNSEPLNDTTKVSVG
EENANGEEKPEKGSGSEFCYGEKEKDRFNRILNCYEGTHNFHNFTTRTKAADPAAWRYII
SFNANTTVTVGGMDFVKCEVVGQSFMLHQIRKMIGLAVAIFRNCAPDSLLEIALQKDVNV
NVPTAPEVGLYLDECFFASYNQKWGDSHEELSMKDYEQEAEDFKMKHIYPHIASTEQKEG
VVGLWLHSLNHRNYPDLCTTGADNDGNTSNEESVDVGNVEDSINLCIEGQVK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggagaacccagatacaaaaacaactatatcaccgccgccacaagaaccagaccccaag
aagctcaaaatgtcgaccaccaccaccagcgatgacgatgaaaccacgaccatggacacc
accaaaaagcaaagatacaagcgtcgaaaggttgcaattttcttcgcttattgcggtgtg
ggataccaaggcatgcaaaagaatccaggcgccaaaaccatcgagggcgacctcgaagaa
gccctttacctctccaacgcggttcccgagcaggaccgcaacaaccctaaacgctatgat
tgggcccgctccgcccgtaccgataagggcgtaagcgccgtcggtcaggttgtatccggc
cgcttctatgtcgacccaccgggcttcgtcgatcgcctcaattccaacatttccccacag
attcggattttcggctacaagcgcgtgacggcatcgtttaacgccaagaagttctgtgat
cggagaaggtatgtgtatctcattcccgtgtttgctcttgatcccagtgctcatcgcgat
agggagagcgttttggctagtcttgggtctgataaggagtttgttaagtgcttggagtgc
tccgagagagggcgtaaagttgggggattgatgggtaagcgcaattatgaattgagaggg
acgagttttgggctagacatttcgtcgaacaccaatgagtctatggttgagtctgagttt
aatgaagaaacgaaggtttctccggacaatgctggtggtgatgattccaaatctgaaccc
aaaaatgaaattagcactagtagtaataacaatggggtttctggagttgaggttgaggat
tccgaggatactgatttgaattcggagccactgaatgatacaacaaaagttagtgttggt
gaagagaacgctaatggagaagaaaagccagagaagggaagtggaagtgagttttgttat
ggtgagaaggagaaggatcggttcaacagaatcttgaattgttatgaggggactcataac
ttccacaacttcaccaccagaactaaagctgcagaccccgctgcttggcgatacatcatt
tcgttcaatgcaaacaccacagttacagttgggggtatggactttgttaagtgtgaagtt
gtagggcagagcttcatgcttcatcaaattaggaagatgattgggcttgcggtagcaatc
ttcaggaactgtgctccggattcattgttagaaatagctttgcaaaaggatgttaacgtc
aatgtgcctacggctcctgaggttggtttgtacttggacgagtgcttctttgcgtcgtat
aaccagaaatggggagacagtcatgaagagctgtcaatgaaagactatgaacaagaggca
gaagatttcaagatgaagcatatataccctcatattgcatccacagagcaaaaagaaggt
gtcgtgggtctctggttgcactctctcaaccaccgtaactaccccgatttatgtactact
ggtgctgacaacgatggaaacaccagcaatgaagaaagtgttgatgtggggaatgtcgaa
gattcaatcaatctttgcatcgagggacaagtgaagtga
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