Prunus mume (Japanese apricot): 103326791
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Entry
103326791 CDS
T03196
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103326791
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103326791
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103326791
NCBI-ProteinID:
XP_008227253
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Position
LG3:17407852..17410450
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AA seq
393 aa
AA seq
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MANRRSLFSLSLIFVFMINSAIATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMNP
GVIYVPAGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTI
SGGILDGQGTALWACKASNGKSCPSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQN
VQMQGVRVSASGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIESVACGP
GHGISIGSLGKEQEEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVN
VENPIIIDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPEHPCSEIKL
EDVKLTYKNQAAESSCSHADGTTEGVVQPTSCL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccgtagaagcctcttttctctctcacttatctttgtgttcatgatcaactca
gccatagccactccagtcacatacaatgtggccagtttaggagccaaagcagatggcaag
actgactccacaaaagccttcctctcagcatgggctaaagcttgtgcctcgatgaatccc
ggtgtcatttatgtgccggcaggaacgttctttcttcgcgatgtggtgtttagtgggcct
tgcaagaacaatgccatcacctttcgcattgccggaacccttgtggccccgtctgattac
cgggtcatcggtaatgcagctaactggattttctttcaccatgtaaacggggttaccata
tcaggtggaattcttgacggccaaggcactgccttgtgggcttgcaaggcctctaatggc
aagagttgtcccagcggagcaacgacattgagtttttccgactcaaacaacattgtggtg
agtggattggcatccctaaacagccaaatgttccacatagtcatcaacgactgccaaaat
gtgcaaatgcaaggtgtcagggtttctgcttccggtaacagccctaacactgatggcatt
catgtccaaatgtcatctggtgtcacaatactcaactccaagattgcaaccggtgacgat
tgtgtctcaattggccccggaacctcaaatttgtggatagaaagcgttgcctgtggacct
ggccatggaattagcattggaagtctaggcaaggagcaagaagaggccggtgtacaaaat
gtaacagttaaaacggttacctttactggtactcagaatggtctaagaatcaagtcatgg
gggaggccaagcactgggtttgctagaaatattcttttccaacatgctacaatggtcaat
gtcgaaaatcctattattatagatcaacattattgccccgacaacaaagggtgccctggt
caggtttctggagttcaaattagcgatgtgacatacgaagacatacacggtacatcagca
acagaagttgcagtaaaatttgattgcagtcccgagcacccttgtagcgagatcaaattg
gaggatgtgaagcttacttacaagaaccaagcagctgagtcttcatgtagccatgcagat
ggaacaactgagggtgtggttcagcctacaagttgtttgtag
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