Prunus mume (Japanese apricot): 103326871
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Entry
103326871 CDS
T03196
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1-like
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103326871
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmum01007
]
103326871
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103326871
Enzymes [BR:
pmum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
103326871
Amino acid related enzymes [BR:
pmum01007
]
Aminoacyl-tRNA synthetase
Class II (A)
103326871
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103326871
Prokaryotic type
103326871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
AAA_27
Motif
Other DBs
NCBI-GeneID:
103326871
NCBI-ProteinID:
XP_008227345
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Position
LG3:19155409..19159424
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AA seq
568 aa
AA seq
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MANGDSKLLGAQLGVLTSNGTASIAKAEFSDIVPIRSIIVRPDDDWSALAGQQVRVGGWV
KTARKGSKGSRFLQLNDGSCLGNLQVFVEADKVDLGQLARTGVCVVVGGVLKLPPGDKEQ
KVELKVEKMVHVGPVDPADYPLPKTSLPLEFVRNFVHLRPRTCTISAVIRIRSALAHATH
IFFLERGFLNVQTPIMNCSDCEGAGEMFQVTTLFSEGEKLEKDLLKNPPPSEADVEAAKF
IVKEKGDVVALLKSSKASKMDIGDAVAELKRAKENLWKLEERSKIQPGIPHKEGKIDYTR
DFFGRPTFLTVSGQLQLEAYACSLSKAYSFGPTFRAEKSHTTRHLAEFWMVEPEMAFAEL
EDDMNCAEAYVKFMCEWLLEKCHEDMEFFAERYDKSCIDRLRMVASTPFERITYTEAVDL
LIEVVKNGKEFENHVEWGIDLSSEHERYLTEVKFQKPVIVYNYPKDIKAFYMRLNDDSET
VAAMDVLVPKVGELIGAPEQVHLILQSILILERGLPVDLYQWYLDLRRFGTVKHSGFGLG
FERMVMFATGLDNIKDCIPNPRIEGRAD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggcgattccaagctgctaggtgcccaactaggcgtccttacctcaaacggc
actgcctccattgccaaagcggaattttccgatatagttcctatccgatccatcattgtg
cgacctgatgatgactggtctgcattggccggccagcaggttcgggttggtggctgggtg
aagactgctcggaagggaagcaagggttcaagatttttgcagctgaatgatgggtcatgc
ttgggaaacttacaggtgtttgtggaagcagacaaggttgacctcgggcagcttgcgcgg
actggtgtatgtgttgtcgtaggtggtgtgcttaagctgcccccgggggataaagagcag
aaggtggagcttaaggtggagaagatggtacatgtcggtccagttgaccctgctgattac
cctttgcccaagaccagcctcccccttgagtttgtgaggaactttgttcatttgcgtccc
agaacctgcacgatctctgcagttattcgaatcagaagtgccctggcacatgcaactcac
atattcttcctagagcgtggctttttgaacgtgcagactccaattatgaattgcagcgat
tgcgagggtgccggtgagatgtttcaagtcacaaccttgtttagtgaaggtgagaagttg
gaaaaggatctgcttaagaaccctcctccatcagaagcagacgtagaagctgctaagttc
attgttaaggagaaaggagatgttgttgctctgctgaaatcttctaaagcaagtaagatg
gacattggtgatgctgtggccgaacttaaaagggcaaaggaaaatctctggaagctggag
gagaggtctaagattcaacctggtatccctcataaggaggggaagattgactatactcga
gatttctttggccggccaacatttttgactgtttctggccaactacaacttgaagcgtat
gcatgttctcttagtaaggcgtattcgtttgggcctacttttcgagctgagaagtcacat
actacaaggcatttggcagaattctggatggtggagcctgaaatggcatttgcggagctt
gaggatgatatgaactgtgcagaggcatatgtgaaattcatgtgtgagtggttacttgaa
aaatgccatgaagatatggaattttttgccgagaggtatgataaaagttgcattgatcgt
ctaagaatggtcgcttcaacaccttttgaacggattacgtacacagaagcagtggacctg
ctaattgaggtggtgaaaaatggcaaggagtttgagaaccatgtggaatgggggattgat
ttgtcatctgagcatgaaaggtacttgacggaggtgaaatttcagaagcctgttattgtt
tacaattaccctaaagatatcaaagcattctacatgaggctcaatgatgattctgagaca
gtggctgccatggatgtgctagtaccaaaggtgggagagttgataggggctccagaacag
gtacacttgatcttacaatcaatattgattttggagaggggactgcctgttgacctatat
cagtggtaccttgacttgcggcgctttgggactgtcaaacatagtggttttggtttaggc
ttcgaacggatggtcatgtttgctactggccttgacaatattaaagattgtattcccaac
cctagaattgagggaagagcagattaa
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