KEGG   Prunus mume (Japanese apricot): 103327108
Entry
103327108         CDS       T03196                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103327108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmum03032]
    103327108
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103327108
Enzymes [BR:pmum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103327108
DNA replication proteins [BR:pmum03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    103327108
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     103327108
    Bloom's syndrome complex (BTR)
     103327108
   FA (Fanconi anemia) pathway
     103327108
SSDB
Motif
Pfam: DEAD RQC Helicase_C HRDC RecQ_Zn_bind ResIII HHH
Other DBs
NCBI-GeneID: 103327108
NCBI-ProteinID: XP_008227617
LinkDB
Position
LG3:complement(21927340..21939982)
AA seq 1223 aa
MHRRESHMRQDRTELGQGSNSAQTPFKVSLSEHAKALDNFSSPNVLSSNFLFSLPTQKPH
AQEATAMSSMACRIQNIGRLPSAQVQKAWHALSNLQISHRNYTKPGKTVLVKDASSRYCR
DVGRTATPSLCDIDKSRTHMQTHQYINGTNSRNSEAATCLGNRFPSSNVNVADVGNFFGG
QSQVKASMVNNFDSRVPGGSFSNNSVHTSQIKHSAKVLVNDIDDDDEILENIDVDQIVEQ
YQSSCTPQPSISKLPPITPSIDKDNIARQEVTSLPPDLCSNCIHGFKIGLCPEAASHLQE
MKDTLITISNELLDDVNDLSPTRIEKLRQDRLQLNKKIQQLERYLCNNSLDEERRKSHFS
ASTATPRSFQYETPQAAAFRTDTVRFDSQVQSHNVPGDYERCNSSSVSFSSVDGFGFSSC
PVEREPYIPKFVEVNYIEGSNDNKWSSNNFPWTKKLEANNKKVFGNHSFRLNQREVINAT
MSGYDVFVLMPTGGGKSLTYQLPALICPGVTLVISPLVSLIQDQIMHLLQVMLFFFFFSS
XXXXXXXXEIFRELNSEYCKYKLLYVTPEKVAKSDVLLRQLENLNARQLLARIVIDEAHC
VSQWGHDFRPDYQALGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIVFRQSFNR
PNLWYSVIPKTKKCLDDIDKFIKENHYDESGIIYCLSRMDCEKVAERLQECGHKAAFYHG
SMDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAG
RDGQRSSCVLYYSYSDYIRVKHMISQGVIEQSPLASGYNRTNTANSGRVLETNTENLLRM
VSYCENDVDCRRILQLIHLGEKFDCTTCKKTCDNCLKIKSFVEKDVTGIAKQLVELVKLT
GQQFSSSHILEVYRGSFSQFVKKHRHQTVSLHGVGKHLAKGEASRVLRHLVTEDLLSEEV
KKSDVYGSVSSILKVNELKACELFSGRKTILIRFPSSVKASKQKNSEVISAKGSLTSGKQ
SPPNIGTEQPQSKANSDLSTKIFTSLKMLRTNLVRESADGVMAYHIFANTTLQNMSSRIP
RTKEELLEINGIGKGKLAKYGDRILETIEAAIKEYYKTDKNSTSCNDSNDMKRKRDGNNN
GNENFDDDDFTKSTDRSRKKAPKRQNKTIEAYSYAEPDYPQLIDDELDLYCYDFEVNASD
MKTNQNAGGRVLPQWSTPGNGRQ
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgcataggagggaatcacatatgaggcaagatcgtaccgaattgggtcaaggttccaac
tctgcccagacgccgtttaaagttagtttgtcggaacatgccaaagcacttgataatttc
tcaagccctaatgttttgagctcaaatttccttttttccttaccaacacaaaaacctcat
gcgcaagaggcaacggctatgagctcaatggcttgccgaattcagaatattggaagatta
ccaagtgcacaagttcaaaaggcttggcatgccctttccaatcttcagatttctcatagg
aactacacaaaacctggaaaaactgttctagttaaggatgctagttccaggtattgtcgt
gatgttggaagaactgctacgccaagcttatgtgacattgataagagtcgcacacatatg
caaacacatcaatacattaatggaaccaattccaggaacagtgaagctgcaacctgtttg
ggtaatcgttttccgtcgagtaatgttaatgttgccgatgtgggaaatttttttgggggg
caaagtcaagtcaaagcatcaatggtcaacaattttgattctcgggttccaggaggatca
tttagcaacaatagtgtccataccagccaaataaaacactctgcaaaagttttggttaat
gacatcgatgatgatgatgaaatacttgagaatattgatgttgaccagatagtggaacag
taccaatcaagttgcacacctcaaccatcgatctccaagcttccacccattactccatct
atagataaagataacattgcaagacaagaggtgactagtttgcctccagatttgtgctca
aactgcattcacgggtttaagataggactttgcccagaagctgcaagtcatttgcaggaa
atgaaggacacgctaattaccatatccaatgaactgcttgacgatgttaatgatctcagt
ccaacgcgaatagagaagcttcgccaagataggttacagcttaataagaagattcagcag
ctcgagagatatctttgtaacaactcattggatgaggaaagacggaagtcacatttttct
gcatccacagcaactcccaggtctttccaatatgaaacacctcaagcagctgcattcagg
actgataccgtgagatttgattcacaggttcaatcacataatgttccaggagattatgaa
agatgtaattcgtcatcagtttcattctcttctgtggatgggtttggtttctcatcttgt
cctgtcgagagggaaccatacatcccaaagtttgttgaagttaactacattgaaggttct
aatgacaacaagtggagtagtaataatttcccatggaccaaaaagctggaggccaataac
aagaaagtgtttggaaatcactcttttcgcctcaaccaaagagaggtcattaatgctacg
atgagcggctatgatgtttttgttctaatgccaactggagggggtaagagcttgacatat
cagctccctgccctaatttgtccaggagtaacattggtaatttctcccctggtgtcactt
attcaagatcaaataatgcatttattgcaggtaatgttattttttttctttttttccagc
nnnnnnnnnnnnnnnnnnnnnnnggaaatctttagagagcttaattctgaatattgtaaa
tacaagctgttatatgtcaccccagagaaagttgcgaaaagtgatgttcttttacggcag
ttggagaatttaaatgctcgtcagttgcttgctaggattgttattgatgaagctcattgt
gtgagtcagtgggggcatgatttcagaccagattatcaggctcttggtatcttgaaacag
aagtttccaaatactccagtgttagctttaacagctactgcaactgctagtgtaaaagag
gatgttgtgcaagctcttggtcttgttaactgcattgttttccggcaaagttttaatcgc
ccaaatttatggtattctgttattccgaagactaagaagtgtctagatgacatcgataag
ttcattaaagaaaatcattatgatgaaagtggaataatttattgtctctcaagaatggac
tgtgaaaaagttgctgagagattgcaggaatgtggacataaagcagcattttaccacggt
agtatggatcctgctcagcgtgcctttgtccagaagcagtggagtaaagatgaaatcaac
attatctgtgctacagtggcatttggaatgggtatcaacaagccagatgtacgctttgta
attcatcactctctcccaaagtctatcgaaggctaccatcaggagtgtggtcgagctggt
agagatggtcagcgttcatcttgtgtgttgtattacagttacagtgactatattcgagtt
aaacatatgattagccaaggagttatagagcaaagcccattggcatctggatacaatcgt
accaatacagctaattctgggagagtactggaaacaaatactgaaaatcttttgcgcatg
gtcagttattgtgaaaacgatgttgattgccgacgaattctacagcttattcatcttgga
gaaaaatttgattgtacaacatgcaaaaagacatgtgataattgtttgaagattaaaagt
ttcgtggagaaggatgtcacagggattgcaaagcaactggttgaactggtgaagttaaca
gggcagcagttttcgtcatctcatattcttgaagtctacaggggctcctttagccaattt
gtcaagaaacacaggcatcagactgtgagcttgcatggagtgggaaaacatctagccaag
ggtgaagcttcccgtgtattacgtcatcttgttaccgaggaccttctttcggaggaagtc
aagaaaagtgatgtttatggatctgtatcatcaatactaaaggttaatgaattgaaagcg
tgtgaacttttctctggcaggaagacaattctaataagattcccttcttccgtaaaagct
tctaaacagaaaaactctgaagtgatttcagctaaaggctcactgacatctgggaagcag
agtcctccaaatattggcactgaacaacctcaatccaaagcaaattcggatctatctacc
aaaatatttacttctttaaaaatgcttcgaactaatctcgttagagaatctgctgatggg
gtcatggcataccacatatttgcgaataccacgctgcagaacatgagcagcagaattcct
agaacgaaggaggaactccttgaaataaatggcattggcaagggtaagttggccaagtat
ggagatcggatacttgaaacaattgaagctgccataaaggaatactacaaaacagataaa
aacagcaccagttgcaatgacagtaatgatatgaagaggaaaagagatggcaacaacaat
gggaatgaaaattttgatgacgacgacttcaccaaaagcacagatcggtcaaggaaaaag
gcaccaaagaggcagaacaaaactattgaggcctatagttatgcggagcctgattacccc
caattgatagatgatgaactagacttatattgctatgactttgaagtgaatgcttcggat
atgaaaactaatcagaatgctggtggaagagtgctgcctcaatggtcaacgcctggaaat
gggcgacagtga

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