Prunus mume (Japanese apricot): 103333827
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Entry
103333827 CDS
T03196
Name
(RefSeq) autophagy-related protein 18g isoform X1
Organism
pmum
Prunus mume (Japanese apricot)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCAS3
BCAS3_WD40
WD40
PROPPIN
Motif
Other DBs
NCBI-GeneID:
103333827
NCBI-ProteinID:
XP_008234943
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Position
LG6:240109..245790
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AA seq
1005 aa
AA seq
DB search
MKKSKGKNNGLLPNSLRIISSCLKTVSTNASTVASTVRSAGASVAASISASEDQKDQVTW
AGFGRLELSHSAFKHVLLLGYQNGFQVFDVEDASNFSELVSRRDGPVSFLQMQPSPAASD
GNQGFRMAHPLLLVVAGDDTNGPGIVHNTSHLGGIGRDSNLESRPGNPVSSPTAVRFYSL
RSHGYVHVLRFRSAVCMIRCSPRIVAVGLATQIYCFDALTLENKFSVLTYPVPQLAGQGS
IGFNVGYGPMAVGPRWLAYASNSPLVSNTGRLGPQNLTPSPGVSPSTSPGSGSYVARYAM
ESSKHLAAGIINLGDMGCKTLYKYCQDLLPDGSNSPISSNSGWKVSRHAGTEMDNAGMVV
VKDFVSRAVISQFKAHTSPISALCFDPSGTLLVTASIYGNNINIFRIMPSSKHSGSGGQN
LDWSSSHVHLYKLHRGITSAMIQDICFSHYSQWVAIVSSKGTCHVFVLSPFGGDAGFRLL
NTQGEEPSLYPVLSLPWWSTSSCIFNQQSCPPPAPVALSVVSRIKYSSFGWLSPVSNTAS
STTGKVFVPSGAVAAVFHNSLSQSPRQSNSRTSTLEHLLVYTPSGHVVQHELQPRIGVDQ
SHSGTQAATSMHMQEEDLRVKVEPIQWWDVCRRSDWPEREDIVLGTSSDRQDVAEINQNK
SVSDGTHGTESLDLNGAVGLERRLETYSGKLHDRSHWYLSNAEVQISSLRLPIWQKSKIC
FYTMGCPRVDSFADGEFEIEKVPVHEIEMRQKELLPVFEQFHIIKSSWDDRVPGGRFPSL
SSSEPHQAQDKILEETVICHSKPASLSSTESSDGAGSSRRIEHFLDFDQMNNEKARTTVC
QILNGPERRANTIVEPSLENHISFSILCTPSEHFKNIDSQVSSCLTNGFPVLESKLTPGG
RVSAEECLSLKAIGISEVSVLYSDQHPSSTNIVAEGAPNLQHPIDLSQFFQEEHCNALVP
NGCHGLTEVITDDVDSDSSHCDKVKAMDEEDSEMLGGMFAFSDEG
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagcaagggcaagaacaatggcttgttgccgaactcacttaggatcatatcg
tcgtgcctcaaaactgtttcgacgaatgcgagcaccgtcgcttctacagttcgctctgct
ggtgcgtctgtagctgcttctatttctgcttccgaggatcaaaaggatcaggtaacttgg
gctggctttggcaggctagagcttagtcactctgcctttaagcatgttctcttacttggt
tatcagaacggatttcaagtttttgatgtagaggatgcctctaatttcagcgaactggtt
tcaaggcgcgatggcccagtttcattcttacagatgcagccctctcctgcagcatctgat
ggtaaccaaggattcagaatggcgcatccattgctgctggttgttgctggagacgacacc
aatggtccagggattgttcataacactagccacttgggagggataggcagagatagtaat
ttggagtctcggccaggaaaccctgtcagctctcctacagctgttcggttttattccctt
aggtcccacggttatgtgcatgttctgagatttcggtctgctgtgtgtatgattagatgc
agtcctcggatagtagctgtgggtcttgcaactcaaatttactgctttgacgcgctcacc
ctcgaaaacaaattcagtgttcttacctatcctgttcctcagctagcaggacaaggatca
attgggtttaatgtcggttatggcccaatggctgtgggtccaaggtggttagcctatgct
tccaacagcccactagtgtcaaacacaggtcgcttgggaccccaaaacctcactccttct
ccaggagttagtccatctacatcacctggcagtggtagttatgtggctcgttatgcgatg
gagtctagtaaacatttggctgctggaataattaacctgggtgacatgggatgcaaaacc
ttatacaaatactgtcaagatctgctcccagatggatctaactctccaatatcatcaaat
tcaggctggaaagttagtcggcatgcaggaacagaaatggataatgcagggatggttgtt
gtcaaagattttgtttcccgagctgttatatcacaatttaaagctcatactagcccaata
tctgctctatgtttcgatcctagtgggacccttctggttacagcctccatatatggaaat
aacattaatattttccggattatgccttcaagcaaacacagtggatcaggtggtcagaac
ttagattggagctcatctcatgtgcacctttacaagttgcatcgtggaataacatcagct
atgatccaggacatttgctttagtcattacagtcagtgggttgcaattgtttcatccaag
gggacctgccatgtttttgttttatccccttttggtggcgatgctggatttcgacttctt
aatactcagggcgaagaaccctccctatatcctgttttatctctaccttggtggtctact
tcttcttgcatttttaatcaacaatcttgtccacccccagcacctgttgctctttccgtt
gtgagcaggataaaatatagcagttttggatggcttagcccagtcagcaatactgcttct
tctacaacagggaaggtgtttgtgccatctggtgctgttgcagctgtattccataattca
ttatctcaaagtcctcggcagagtaactcaaggaccagtaccttggagcatctattagtt
tatactccatctggtcatgtagttcaacatgaacttcagccaaggataggggtagatcag
agtcatagtggtacccaggcagctacgtctatgcatatgcaggaggaagatctgagagtg
aaagttgaacctattcaatggtgggatgtatgtaggcggtcagactggccagaaagagag
gacattgttttaggtacctcatctgatagacaagacgtagcagaaataaaccaaaataaa
tcagtttctgacggtactcatgggacggagtctctagacttaaatggtgctgttgggttg
gaaaggagactggaaacttactctggaaagctccatgataggtcccactggtacctctct
aatgcagaggtgcaaataagttctttgagattaccaatatggcaaaagtctaagatttgt
ttttatacaatgggttgtccaagagtcgatagttttgctgatggagagtttgaaattgaa
aaagtccctgttcatgaaattgaaatgagacagaaggaattattgcctgtttttgagcag
ttccatatcatcaaatcaagctgggatgacagagtcccaggtgggagatttcccagtctt
tcctcgtcagagcctcatcaagctcaagacaagatcttggaagagactgttatttgtcac
tcaaagcctgcatcgcttagctccacggaaagctcagatggggcaggttcgtcaagaaga
attgagcatttcctcgattttgatcaaatgaacaatgagaaggcccgcacaacagtttgt
cagatcttgaatggcccggaaagaagagccaatacaattgttgagccttcattagaaaac
catatatctttcagcattctgtgtactccatctgaacactttaagaacatcgattctcaa
gtttccagttgtctcaccaacggttttcccgtgttagaaagtaagttgaccccaggagga
agagtttctgctgaagaatgcctgtctttaaaagcaattgggatcagtgaggtctcagtt
ttatactctgatcaacatccttcaagtaccaatatcgtggcagagggggctcccaatttg
cagcatccaatagatctttcgcagtttttccaggaggagcattgtaacgcattggtgccg
aacggatgccatgggttaacggaagtcataactgatgacgttgacagtgacagtagccac
tgcgataaggtgaaagccatggatgaggaagatagtgaaatgcttggaggcatgtttgcc
ttttctgatgaaggttga
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