Prunus mume (Japanese apricot): 103337752
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Entry
103337752 CDS
T03196
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103337752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103337752
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103337752
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103337752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
103337752
NCBI-ProteinID:
XP_008239145
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All DBs
Position
LG7:complement(10639476..10641602)
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AA seq
308 aa
AA seq
DB search
MEDVGVVECLTTCDGIYEVDSNHSRRRHHHHHFLFLASAKSHNKALSPATSVHELLQCPV
CTNSMFPPIHQCLNGHTLCSICKLRVNNRCPTCREELGDIRCLALEKVAESLELPCKYCS
LGCMEIFPYYNKLKHEAQCNFRPYNCPYPGSECSVVGDIPFLVGHLREDHKVDMHIGSTF
NHLYVKSNPREVDNAARMLMVFNCYSQYFCLHFEAFLLGMAPVYIAFLRFMGDAVEARKF
GYRLEVGANGRKLIWEGTPRSIRDSDQKVRDSHDGLIIQRNMALFFSGGDRKQLKLRVAG
RIWKENST
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgttggtgttgttgaatgtttgacaacatgtgatgggatctacgaggtagac
tctaaccacagccgccgtcgccatcaccatcaccactttcttttcttggcctcagccaag
tctcacaacaaagctctgtctccggccacaagtgtccatgaacttctccaatgccctgtc
tgcacaaactctatgttcccaccaatccaccagtgcctaaatgggcacactctgtgctcc
atctgcaaattgagggtgaacaaccggtgcccgacttgtagagaagaacttggagacatc
agatgtctggcattggagaaggtagcagagtcactagaacttccttgtaagtactgttct
ttgggctgcatggagatcttcccttactacaacaaacttaaacatgaagctcagtgtaac
tttagaccatacaattgcccatatcctggatctgagtgctcagtagttggggatattcca
tttttggttggccatctacgagaagatcacaaggttgacatgcacattggatcaaccttc
aatcatctctatgttaagtcgaatccccgtgaggtagacaatgcagcaaggatgcttatg
gtgtttaactgttacagccagtacttctgcctgcactttgaagccttcctacttggcatg
gctccggtttacattgcattccttcgtttcatgggtgatgccgttgaagcacgaaaattt
ggttacagactggaggtgggcgcaaatggcaggaaactaatatgggaaggaacccctcgg
agcatacgtgatagtgatcagaaggttagggatagccatgatggtctcataatccagcgt
aacatggcactttttttctctggtggagacaggaagcagctcaagctccgggttgccgga
cggatttggaaggaaaacagcacctag
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