Prunus mume (Japanese apricot): 103338454
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Entry
103338454 CDS
T03196
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00531
Glycosaminoglycan degradation
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
103338454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmum00536
]
103338454
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
103338454
Glycosaminoglycan binding proteins [BR:
pmum00536
]
Heparan sulfate / Heparin
Enzymes
103338454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
103338454
NCBI-ProteinID:
XP_008239880
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All DBs
Position
LG7:complement(14566312..14570995)
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AA seq
547 aa
AA seq
DB search
MEFRLSLVLILVSLPAILAQGVGNTKKVGNVKVVVNGILAIAQVDNNFICATIDWWNHEK
CDYNQCPWGSASALNLNLSHPLLAKSIQAFNQLRIRIGGSLEDQLLYDVGNLKYPCHPFR
KQSHSLFGFSRGCLPMSRWDELNQFFSKTRPIITFSLNALSGRHHKSGGVWVGDWDSSNT
YDFINYTVSKGYQIDSWEFGNELSGRGVGASVGAEQYGKDLIKLKHIINQLYNKSRTKPA
LVAPGGFYDQAWFAKLLQVSGSGIVNVITQHMYNLGAGVDPKLVSRILNPGYLDRASGTF
RDLEQTVKKNGPWASIWVGESGGAYNSGGRNVSDTFVNSFWYLDQLGMSAKYNTRVYCRQ
SLVGGNYGLLNRTSFVPNPDYYSALLWHRLMGQGVLAVNSNASADLRTYAHCARGRAGIT
VVLINFSNDTDFIVNVENILDFNLGAHERNISKESYFKRSLKKTVSWVGRKALDKPVYRE
EYHLTPKKGNLRSKTMVLNGAPLEITKDGNIPELEPAHVLANSPLTISPLSIKFVVLPYF
DAHYACA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaattccgtctctccttagttctcattctggtttctctccctgcaattttagctcaa
ggtgttgggaatactaaaaaagttggaaatgttaaggttgtggttaatgggattttagct
attgcacaagttgataataatttcatctgtgccactattgattggtggaatcatgaaaag
tgcgactacaaccagtgtccatggggatctgcatctgcgttaaatttgaacttgtctcat
cctttgcttgccaagtcaatccaagctttcaatcagttaaggatcagaattggaggttcc
ttggaagaccaactcttgtacgatgtaggaaatttgaaatatccttgccatcctttcaga
aagcagagtcatagcttgtttggattttctagaggatgtttacctatgagtagatgggat
gaactgaaccaatttttcagtaagacaaggcccatcatcacatttagcttgaatgcactg
tcagggaggcaccacaaaagcgggggtgtttgggttggagattgggactctagcaacact
tatgattttattaattataccgtttcaaagggataccagatagattcatgggaattcggt
aatgagctcagtggtcgtggtgttggagctagtgttggagctgaacaatatggaaaagac
ttgatcaagcttaaacatattatcaaccagttgtacaataagtcccgcactaaacctgca
cttgtggcacctggaggattctatgaccaagcatggtttgccaagcttcttcaggtttct
ggttcagggatagtcaatgttatcactcagcatatgtacaatttgggtgcaggtgttgat
cccaagttggtgagcagaattttgaatcccggttacttggaccgtgcatctggaacattc
cgtgatcttgagcaaacggtgaaaaagaacggcccttgggcttctatatgggtcggagag
tctggaggggcttataacagtggtggtcgtaatgtgtctgacacatttgtgaacagcttt
tggtacttggatcagcttggaatgtcagccaagtacaataccagagtatattgcaggcag
tctttagttggtggaaactatggtctcctgaacagaacgtcatttgttcctaaccctgat
tactacagtgcgcttctatggcatcgacttatgggacaaggtgttcttgctgttaacagc
aatgcttctgcagatttacgcacttacgcccattgtgcaagaggaagagcaggtataact
gtagtccttatcaattttagcaatgacaccgatttcattgtcaatgttgaaaatattttg
gacttcaatctgggtgctcacgagagaaacattagcaaagaaagttatttcaagcgcagc
cttaagaaaacggtgtcatgggtaggacgcaaagcattagacaaaccagtttacagagaa
gaataccatttgacaccaaaaaaggggaaccttagaagcaaaaccatggttctcaatgga
gctccattggagattactaaggacggaaacatcccagaattggaacctgctcatgtcctt
gcaaattctccgctaacgatcagccctttgtccatcaagtttgtagtgttgccttacttt
gatgctcactacgcttgtgcatga
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