Prunus mume (Japanese apricot): 103339217
Help
Entry
103339217 CDS
T03196
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103339217
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103339217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
VacA2
Motif
Other DBs
NCBI-GeneID:
103339217
NCBI-ProteinID:
XP_008240719
LinkDB
All DBs
Position
LG8:4027419..4028965
Genome browser
AA seq
400 aa
AA seq
DB search
MAEVTTSCFSRVALLILYILHQSCVAKSTLIFNVLSFGAKPNGVIDSTQAFLDVWTAACA
SSDSTTIRVPKGRYLLPNAMVFKGDNCKSTDITFRIDGTLIASSDYRVLGQANNWLSFEG
VTGVSIIGGALDAKGTSLWACKLAGSTDCPNGGATSLSFTNSKNININGLMSLNSQMFHI
VINGCQDVRIKGVKVNAAGNSPNTDGIHVQLSRNVAIFNTSIKTGDDCVSIGPGTKDLWI
EQITCGPGHGISIGSLAKDLEEEGVQNVTVKNAIFKGTQNGLRIKSWARLSNGFVQGVQF
LDVVMFNVQNPIVINQNYCPHNINCPAQVSGVKVSDVVYQNIQGTSATAIAIKFDCSATN
PCSGIRLENVSLTCRNQEVQSHCANANGKIVGTVQPNNCL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggttacaacaagttgttttagcagagtagcactactcatcctatatatccta
caccaatcatgtgttgctaagagtacattaattttcaatgtcctaagctttggagccaag
cctaacggtgtaatagattctacacaagcttttctggatgtatggactgcagcatgtgcc
tcctctgattccactaccatacgtgtaccaaaagggaggtatttgcttcccaatgctatg
gttttcaaaggtgataactgcaaaagcacagatattacttttcgaattgatggaacattg
atagcttcgtctgattaccgagtccttggccaagctaacaactggctaagcttcgaagga
gttaccggtgtgtccattattggaggtgcccttgacgctaaaggtacctccttgtgggca
tgcaagttagctggaagcactgattgccccaacggaggagcaacgagtctgagttttacg
aactccaaaaacattaacatcaatggactaatgtcattgaacagccagatgttccacatt
gtgataaacggctgccaagatgttcgcatcaaaggggtcaaagtcaatgcagctggaaat
agcccaaacactgatggtatccatgtccaattgtcaagaaatgttgcaatcttcaatacc
tctatcaaaactggagatgattgtgtctcgattggccccggaacaaaggacttgtggatc
gagcaaataacttgtggtcctggccatggcattagcatagggagtttagccaaagacttg
gaagaggaaggggtccaaaatgtgacagttaaaaatgcaattttcaagggtactcaaaat
ggtttgaggattaagtcttgggcaaggctgagcaacggatttgttcaaggtgttcaattc
cttgatgtcgtcatgtttaatgtccaaaatcctattgtaataaaccaaaactattgccca
cacaacatcaactgccctgctcaggtatcaggtgtgaaagtcagtgatgtcgtgtatcag
aacattcaaggaacatcggctacggccatcgcaataaaatttgattgtagcgcaacaaat
ccatgtagtgggataagactcgaaaacgtgagtttgacctgcaggaatcaagaggttcag
tcacattgtgccaatgcaaatggaaagattgttggcactgttcaaccaaacaattgtttg
taa
DBGET
integrated database retrieval system