Prunus mume (Japanese apricot): 103344576
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Entry
103344576 CDS
T03196
Name
(RefSeq) cyclin-H1-1 isoform X2
KO
K06634
cyclin H
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03022
Basal transcription factors
pmum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103344576
09124 Replication and repair
03420 Nucleotide excision repair
103344576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103344576
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103344576
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103344576
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103344576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
HEPN_RnaseLS
LupA
Motif
Other DBs
NCBI-GeneID:
103344576
NCBI-ProteinID:
XP_008246397
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All DBs
Position
LG1:24262124..24266776
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AA seq
337 aa
AA seq
DB search
MADFQTSTHRAKWIFTPEDLVGKYKAANQRAIQTLEKYGATLMEVDVDGTISYPEPQVIA
KDNADKHSRPKPISIEEEQFMRVFYENKLQEVCKNFHFPHKVQATALIYFKRFYLQWSVM
QHHPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPY
RSIEGFIDDMEEFCGINDDQLQILQNLLHAAKMEVDKIMLTDAPLLFPPGQLALAALRGA
NQVHKVVDFERYLRSILSRQSSEHTVSELIEFLNAIDSWARKYKFPSDKDLKHINRKLKS
CWGLSSHDESKKRDKKSKHKSKRSSNEVQPVPSHTEM
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttccagacctcgactcaccgagccaagtggatctttacgcctgaagatctg
gttggtaaatacaaggctgctaatcaaagagcaatacaaacattggagaagtatggagca
acactaatggaagtagatgttgatggcacaatatcataccctgaacctcaagttattgca
aaagataatgctgacaagcattctcgtccaaaacccattagcattgaagaggagcagttt
atgcgagtattttatgaaaataaacttcaagaagtgtgcaaaaactttcactttcctcat
aaagttcaggcaacagctcttatatatttcaaaaggttttatctacaatggtcggtgatg
caacatcatccaaaaaatataatgttaacctgtatatatgcggcttgtaaaatagaagaa
aaccacgtatcagcagaggagcttggtaaggggatctcacaggatcatcaaatgatactc
aataatgagatgatagtttatcagagtttggaatttgatcttattgtttatgcaccatat
cgctcaattgaaggttttatcgatgatatggaggaattctgtggaataaacgatgatcaa
ctccaaattctgcagaatttgcttcatgctgcaaagatggaagtggataaaatcatgctc
acggatgcaccacttctattccctcctgggcagttggcattggctgctttgcgtggtgca
aatcaggtgcacaaagttgttgactttgagagatacctgaggagcattctctctcgtcag
agttctgaacataccgtttcagagctaattgaattccttaatgcaatagattcttgggca
agaaaatacaagtttccttcagacaaggatctcaagcacatcaaccgaaaactgaaatct
tgttggggtcttagttcacatgacgaaagtaagaagcgggataagaaatcgaagcacaag
tcgaagaggagctcaaacgaagtgcaacctgtaccttctcatactgaaatgtaa
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