KEGG   Prunus mume (Japanese apricot): 103344576
Entry
103344576         CDS       T03196                                 
Name
(RefSeq) cyclin-H1-1 isoform X2
  KO
K06634  cyclin H
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03022  Basal transcription factors
pmum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103344576
  09124 Replication and repair
   03420 Nucleotide excision repair
    103344576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmum03021]
    103344576
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103344576
Transcription machinery [BR:pmum03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103344576
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103344576
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B HEPN_RnaseLS LupA
Other DBs
NCBI-GeneID: 103344576
NCBI-ProteinID: XP_008246397
LinkDB
Position
LG1:24262124..24266776
AA seq 337 aa
MADFQTSTHRAKWIFTPEDLVGKYKAANQRAIQTLEKYGATLMEVDVDGTISYPEPQVIA
KDNADKHSRPKPISIEEEQFMRVFYENKLQEVCKNFHFPHKVQATALIYFKRFYLQWSVM
QHHPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPY
RSIEGFIDDMEEFCGINDDQLQILQNLLHAAKMEVDKIMLTDAPLLFPPGQLALAALRGA
NQVHKVVDFERYLRSILSRQSSEHTVSELIEFLNAIDSWARKYKFPSDKDLKHINRKLKS
CWGLSSHDESKKRDKKSKHKSKRSSNEVQPVPSHTEM
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggccgatttccagacctcgactcaccgagccaagtggatctttacgcctgaagatctg
gttggtaaatacaaggctgctaatcaaagagcaatacaaacattggagaagtatggagca
acactaatggaagtagatgttgatggcacaatatcataccctgaacctcaagttattgca
aaagataatgctgacaagcattctcgtccaaaacccattagcattgaagaggagcagttt
atgcgagtattttatgaaaataaacttcaagaagtgtgcaaaaactttcactttcctcat
aaagttcaggcaacagctcttatatatttcaaaaggttttatctacaatggtcggtgatg
caacatcatccaaaaaatataatgttaacctgtatatatgcggcttgtaaaatagaagaa
aaccacgtatcagcagaggagcttggtaaggggatctcacaggatcatcaaatgatactc
aataatgagatgatagtttatcagagtttggaatttgatcttattgtttatgcaccatat
cgctcaattgaaggttttatcgatgatatggaggaattctgtggaataaacgatgatcaa
ctccaaattctgcagaatttgcttcatgctgcaaagatggaagtggataaaatcatgctc
acggatgcaccacttctattccctcctgggcagttggcattggctgctttgcgtggtgca
aatcaggtgcacaaagttgttgactttgagagatacctgaggagcattctctctcgtcag
agttctgaacataccgtttcagagctaattgaattccttaatgcaatagattcttgggca
agaaaatacaagtttccttcagacaaggatctcaagcacatcaaccgaaaactgaaatct
tgttggggtcttagttcacatgacgaaagtaagaagcgggataagaaatcgaagcacaag
tcgaagaggagctcaaacgaagtgcaacctgtaccttctcatactgaaatgtaa

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