Protobothrops mucrosquamatus (Taiwan habu): 107297891
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Entry
107297891 CDS
T05763
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03440
Homologous recombination
pmur03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107297891 (BRIP1)
03460 Fanconi anemia pathway
107297891 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107297891 (BRIP1)
Enzymes [BR:
pmur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107297891 (BRIP1)
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107297891 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
107297891 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
DUF6399
Motif
Other DBs
NCBI-GeneID:
107297891
NCBI-ProteinID:
XP_029142237
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MALRTSEYTIGGVKIIFPCKAYPSQLAMMNAIVKGLSSKQHCLLESPTGSGKSLALLCSA
LAWQQSLYDKPLDDLCSKECKKTEALKPCHCPCHAKSSESLSRTTLASKLSAKQQASSHE
EDDSDNDFKVEKKRIRSLEAEHQGRKRYRLATGTQLVDALEVHEQRKNGELTVTLGKTVV
NHSPPTPCTKCSCFDLEQNTKNAAEAKKENGGKLPIPKIFFGTRTHKQIAQIVKELHRTR
YSSVRMTILSSREYSCVHPRVSRGSNKNEKCSELLEGKEGVSCSFYHGAHRLTERLSIPS
ADRKHQTWDLEELVRLGKKLRSCAYFAARELMAYAEIVFCPYNYLLDSQIRESMEIELKG
QVLILDEAHNIEDCARESASYNVTEEQLILAREELDAMVNNHIRSNDHEPLRAVCYSLTN
WLRVACSQLIQSGYETSSKVWSGSQMVAILHEMGITVALFPLLQKHLHTVLEKEEKFSGL
DQPVSIPVISPSTQFILKGLFMVIHYLFKENHRFADDYRIALQQTFIWMNENPPEILDKD
GFLARPRKRSRRKTAVNRLNFWCLNPAVAFSNLSSVVRSIVLTSGTLSPMDSFSSELGVN
FSIQLEANHVIRNSQVWVGTIGAGPKHRELRATFQHTETFEFQDEVGELLLSVCRTVQRG
VLCFLPSYKMLDKLKDRWLHTSLWEKLELIKTVLVEPKGGDKSDFDELLQIYSDAIKSQN
GRDGALLIAVCRGKVSEGLDFSDDNARAVLTIGIPFPNLKDLQVELKRKYNDQHSKARGL
LTGSQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFGKNPSKYTAGLSKWIRQQIQH
YKDFDCALGSLDAFAQMNQNGAGAALPDNNSSLLKSTNPKTLTPLSPPEEPLSLSPGALG
EKETQDSALETDRITTHPTTSDSPSSYQTIKQNKFTDSSPKASPVENRRGKANGQFSAGS
IKSCFTKMLNSTPTVKKNYVFKATGQTERAMGEKSPSVACGPQRNTFWVEEDQPIRQLAD
GEMVSSSPRTKIGLVPEKCPHESQQTGHKDMEEVASSPRRANLELSRSDLGVETDAGDDR
LCFTPELYDDEELVEEKNEGSIHRHNSTLASFETANTVLLEELCPPNAQKPGDATSGFKG
EAGADAEWWGIMEDSQNNRSAIEAAGHNVGLEEEAKDKENQLPGSRIKGVDE
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcattacgaacatcagaatacaccattggtggagtgaaaattatcttcccttgtaag
gcttacccatcacaacttgctatgatgaatgcaattgtgaaggggctgagctccaagcaa
cactgcctgctggagagtcccactggaagtggaaagagcttggcactgctctgctctgcg
ctggcctggcagcagtccctctatgataaaccgctggatgacttatgctcaaaagaatgc
aagaagactgaggctttgaaaccgtgccactgcccatgccacgctaaatcgtccgaaagc
ctctcacgaacgaccttggcttcaaaactgtctgccaaacagcaagcctcatcccatgaa
gaagatgacagcgacaacgatttcaaagtagaaaagaagaggattcgttcactcgaagca
gagcaccaggggagaaaacgatatcggctggccacaggaacccagctggtggatgctttg
gaagttcacgaacagcggaaaaatggggaattgactgtgactcttggaaaaaccgtggta
aaccacagtcctcccactccctgcaccaagtgttcttgcttcgaccttgagcaaaacacc
aaaaatgctgccgaggctaagaaggagaatggagggaagttgccgatccccaaaatattt
ttcggcacccgaactcacaagcaaatagctcagattgtgaaggagctgcaccggactcgc
tactcaagcgttcgcatgaccattctgtcaagtagggagtattcctgcgtccatccacgg
gtctcccgagggagcaacaagaatgaaaagtgctcagagttgctggaaggaaaagagggc
gtgtcttgttctttttatcacggagcccataggctgaccgagcgtctctcgataccgtcg
gcagatagaaaacatcagacttgggatctggaagaattggtgcgcttgggaaagaaactc
cgatcctgcgcctactttgccgctcgcgagctaatggcgtatgccgagattgtgttctgt
ccatacaactaccttttggactctcagataagagaaagcatggaaattgagctgaaaggt
caggtgctgattttagacgaagctcataatattgaggactgtgcacgggagtcggccagc
tataacgtgacggaggaacagctcatattggcacgagaggagctggacgcgatggtgaac
aaccacattaggtcgaacgaccacgagcctttgcgtgctgtgtgctacagtctgacaaat
tggttaagggttgcctgcagtcagctgatccagagcggttatgagacctcaagcaaagtc
tggagcggaagtcaaatggtggccattttgcatgaaatgggaattacagtggccttattt
ccccttttacagaaacatcttcacactgtgcttgaaaaggaagaaaagttttctgggtta
gaccaaccggtttccattccagttataagtccttcgactcaatttatcctaaaaggtctc
tttatggtcatccactatcttttcaaagaaaaccacagatttgccgacgattaccgaatt
gccctgcagcaaactttcatctggatgaatgaaaacccacctgagattctggataaagac
ggtttcttggcccgtcctcggaaaagatcacgacgtaaaacggccgtaaacagactcaac
ttctggtgcttgaatccagctgtggccttctccaatttaagcagtgtggtcagatccatc
gttttaacctcgggaacgctttctccaatggattccttttcatccgagctcggggtgaac
ttctccattcagcttgaagcgaaccatgtcattagaaattcacaggtctgggtcggtacc
attggagccggcccgaaacacagggagttacgggcaactttccagcacacggaaacgttt
gagtttcaagatgaagtcggtgagctcttgctgtcagtctgtcggacggtacaacgtggg
gttttgtgctttttgccctcttacaagatgttagataaattgaaggaccgctggctgcac
accagtttgtgggagaagctggagctgatcaaaacagtccttgtggaacccaaaggaggc
gacaaatctgattttgatgagctgcttcaaatatactccgatgccatcaagtctcagaat
ggcagagacggagcgctgcttatagctgtgtgcagaggcaaagtcagcgaagggctggat
ttctccgatgacaacgcccgggcggttctcaccattggcattccatttccaaacttgaaa
gatcttcaggtggaactgaaaaggaaatacaacgatcaacactcaaaagccaggggtctt
ctgacaggaagccagtggtacgaaatccaggcctacagggctctgaaccaagcccttggc
aggtgcattcgtcaccgaaacgattggggggcccttattttagttgatgatcgttttgga
aagaaccccagtaaatacacagctgggttgtctaaatggattcggcagcagatccagcac
tacaaagacttcgattgcgccctcggttccttggatgcatttgctcaaatgaaccagaat
ggcgctggagctgcacttccggataacaacagctctcttctcaagtctacaaatccaaag
actctgacacccctttctcctccagaggaacctctttctttatccccaggagctcttggt
gaaaaggaaacacaagattcagctctggaaacagaccgcatcacaactcacccaaccaca
tccgattctccatcctcttaccagaccataaaacaaaataaatttacagattccagcccc
aaggcttcgcctgttgaaaacaggagggggaaagcgaacggtcagttctctgccggcagc
ataaaaagttgcttcaccaaaatgctgaattcaacgccaacggtaaagaagaattacgtc
ttcaaggctaccggacaaacagaaagagcaatgggggaaaagagtccatccgttgcctgt
ggacctcagcggaatacattctgggttgaagaagaccaaccaataagacaattggcagac
ggggaaatggttagcagttctccgagaacaaagattggcttggtgcctgagaaatgtccc
catgaaagccagcagactggacataaagacatggaggaggtagcgtcttctccaaggaga
gcaaacttagaactttccaggtcagacctaggtgtcgaaactgacgcaggagatgacagg
ctctgttttacgcctgaactgtatgatgacgaagagttggtggaagagaagaacgaaggc
tcgattcaccgtcacaacagtactttggcttcctttgaaaccgcaaacaccgttctgctg
gaagaactttgtccacccaacgctcagaagcccggagatgccacctccgggtttaaaggt
gaagcaggagcggacgcagagtggtgggggatcatggaagacagtcagaataacagaagt
gccattgaggcagctgggcataatgttggcctagaggaagaggcaaaggataaggaaaac
cagcttcctggatcacggatcaaaggtgttgacgaatga
DBGET
integrated database retrieval system
