Paracoccus mutanolyticus: DPM13_08225
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Entry
DPM13_08225 CDS
T05551
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmut
Paracoccus mutanolyticus
Pathway
pmut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DPM13_08225 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmut03019
]
DPM13_08225 (pnp)
03016 Transfer RNA biogenesis [BR:
pmut03016
]
DPM13_08225 (pnp)
Enzymes [BR:
pmut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DPM13_08225 (pnp)
Messenger RNA biogenesis [BR:
pmut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DPM13_08225 (pnp)
Transfer RNA biogenesis [BR:
pmut03016
]
Prokaryotic type
tRNA degradation factors
DPM13_08225 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
AWX93144
LinkDB
All DBs
Position
1525096..1527240
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AA seq
714 aa
AA seq
DB search
MFDEVKKSIQWGQETLTLETGKVARQADGSVIATLGETSVMANVTFAKEPKPGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPSEKETLTARLIDRPCRPLFAPGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGVPFMGPIGAARVGFANGEYVLNPDVADMDNLRGNPEQR
LDLVVAGTKDAVMMVESEAYELTEDEMLGAVKFGHEAMQPVIDLIIDLAEEAAKEPFDFQ
SPDYSELYARVKSLGETDMRAAYAIRDKGERRDAIEAAKAKVLAGLSEEELADANLGSAL
KKLESGILRGDIINGGARIDGRDNRTVRPIVSEVGILPRTHGSALFTRGETQALVVTTLG
TGDDEQIIDALHGNSRSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
PTDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLVLEDGGKYA
VLTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMSQALAQAKDGRLHILAE
MSKALTEGRREFSAHAPRIETMTIPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGVIK
IASANADSIKKAYDMIYSIVAEPEEGKVYTGKVVKLVDFGAFVNFFGKRDGLVHVSQIAS
KRLNHPNEILKEGQEVKVKLLGFDDRGKVRLGMKMVDQETGEEIAPEKKEESAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgaagtgaagaaatccatccagtggggccaggaaacgctcacgctggaaacg
ggcaaggttgcccgtcaggccgacggctcggtcatcgccacgcttggcgaaaccagcgtc
atggccaacgtgaccttcgcgaaagaacccaagcccggtcaggacttcttcccgctgacc
gtgcactaccaggaaaaatactatgccgccggcaagatcccgggcggcttcttcaagcgc
gaggcgcgcccgtcggaaaaggaaaccctgaccgcgcgcctgatcgaccgtccctgccgc
ccgctgttcgcccccggcttcaagaacgaagtcctggtgatgtgcaccgtgctgtcgcat
gacctggtcaacgaccccgacatcgtggcgatgatcgccgcctcggccgcgctgaccatc
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggtttcgccaatggcgaa
tatgtgctgaaccccgatgtcgcggacatggacaacctgcgcggcaatcccgaacagcgt
ctggaccttgtcgtcgccggcaccaaggacgccgtgatgatggtcgaatcggaagcctat
gagctgaccgaggacgagatgctgggcgccgtgaagttcggccacgaggcgatgcagccg
gtgatcgacctgatcatcgacctggccgaagaagccgcgaaagagcccttcgacttccag
tcgccggactattccgagctttacgcccgcgtgaaatcgctgggcgagacggacatgcgc
gccgcctatgccatccgcgacaagggtgagcgccgcgacgccatcgaggccgccaaggcc
aaggttctggccggcctgtccgaggaagaactggccgatgccaacctgggctcggccctg
aagaagctggaatcgggcatcctgcgcggcgacatcatcaacggcggcgcccgcatcgac
ggccgcgacaaccggaccgtccgccccatcgtgtccgaggtcggcatcctgccccgcacc
catggctcggcgctgttcacccgcggcgaaacccaggcgctggtcgtgaccacgctgggc
accggcgacgacgaacagatcatcgacgcgctgcacggcaactcgcgctcgaacttcctg
ctgcactacaacttcccgccctattcggtcggcgaggttggccgcgtcggttcgcccggc
cgccgcgagatcggccacggcaagctggcctggcgcgcgctgcaagccgtgctgccggcg
ccgaccgacttcccctacacgatccgcgtcgtgtccgagatcaccgaatcgaacggttcg
tcctcgatggcttcggtctgcggcggatcgctgtcgatgatggacgcgggcgtgccgctg
aaggcgccggtcgccggtgtcgccatgggcctggtgctggaagacggcggcaaatatgcc
gttctgaccgatatcttgggtgacgaagaccacctgggcgacatggacttcaaggtcgcc
gggaccgagaacggcatcaccagcctgcagatggacatcaaggtcgcgggcatcaccccc
gagatcatgagccaggccctggcccaggccaaggatggccgcctgcacatcctggccgag
atgtcgaaggccctgaccgagggccggcgcgagttcagcgcccatgccccgcgcatcgag
acgatgaccattccgaccgacaagatccgcgaagtgatcggctcgggcggcaaggtcatc
cgcgagatcgtcgaggtttccggtgccaaggtcgacatcaacgacgacggcgtcatcaag
atcgcctcggccaacgccgattcgatcaagaaggcctatgacatgatctattcgatcgtg
gccgagccggaagagggcaaggtctataccggcaaggtcgtgaagctggtcgatttcggc
gccttcgtgaacttcttcggcaagcgcgacggcctggtgcatgtcagccagatcgcctcg
aagcgcctgaaccatcccaacgagatcctgaaggaaggccaggaggtcaaggtcaagctt
ctgggctttgacgaccgcggcaaggtccgcctgggcatgaagatggtcgaccaggaaacc
ggcgaggaaatcgcccccgagaagaaggaagaatcggccgagtga
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