Pseudomonas muyukensis: KSS95_22105
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Entry
KSS95_22105 CDS
T07704
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pmuy
Pseudomonas muyukensis
Pathway
pmuy03410
Base excision repair
pmuy03430
Mismatch repair
pmuy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KSS95_22105 (recJ)
03430 Mismatch repair
KSS95_22105 (recJ)
03440 Homologous recombination
KSS95_22105 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuy03400
]
KSS95_22105 (recJ)
DNA repair and recombination proteins [BR:
pmuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KSS95_22105 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KSS95_22105 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KSS95_22105 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QXH34800
LinkDB
All DBs
Position
complement(4983037..4984746)
Genome browser
AA seq
569 aa
AA seq
DB search
MHIEPRPLPSPLPLLGNLPPLLTRLYAARGVQSAVELDKSLARLLPYQQLKGIEAAVDLL
VEALDLRQRILIVGDFDADGATASTVGMLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALQRQPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGEQLPDADAIVNPNQPGCGF
PSKSLAGVGVIFYVLMALRARLRSLGRYETQAQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCDDAALALDMAQQLDGLNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVAGLHIRDALDAVAARHPALISKFGG
HAMAAGLSLPAEHFPAFAEAFDEEVRRQLREEDLTGRLLSDGTLAVEEFHLDLARALRNA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVRLDGIAFGIDREVWPNPTVR
WVELAYKLDVNEFRGNESVQLMIAHMEAR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcgaaccccgccccctgccatcgcccctgccgttgctgggcaacctgccaccg
ttgctgacccgcttgtacgccgcccgtggtgtgcagtcggcggtcgaactggacaagagc
ctggcgcggctgctgccgtaccagcagctcaagggcatcgaggcggcggtggacctgctg
gtcgaggccttggacctgcgccagcgcatcctcatcgtaggcgacttcgacgccgacggc
gccacggccagcaccgtgggcatgcttggcctgcgtctgctgggcgcggcccatgtcgac
tacctggtgcccaaccgtttcgagtacggctatggcttgaccccggagatcgtcgaggtt
gccttgcagcgccagccgcagctgttgatcaccgtggacaacggtatttccagtgtcgag
ggcgtggcggcggccaaggcggcggggctcaaggtgctggtcaccgaccaccacttgccg
ggcgagcagttgccggacgcggacgccatcgtcaatccgaaccagccgggctgcggcttc
ccgagcaagtccctggctggagtcggggtgattttctatgtgctgatggcattgcgggct
cgcttgcgcagcctgggccgctacgaaacgcaggcgcagccgaacatcggcgagttgctc
gacctggtggccctgggcagtgtcgccgacgtggtgccgctggatgccaacaaccggatc
cttgtgcatcagggcctggagcgtatccgcgccggccgtgcgcggccggggctcaaggcc
attctcgaagtggcccggcgtgatcaccggcgtatcacttccaccgacctgggcttcatc
ctcggccctcggctcaatgcggccgggcggttggacgacatgagcctgggtatcgagtgc
ctgttgtgcgatgacgcggcgctggcgctggacatggcccagcagctcgatggcctgaac
caggaccgcaagtccatcgagcagggcatgcagcgcgaggcgctggcccagctcaaggac
ttgccggtggagtccatgccttacggcctgtgcctgttcgatgcggattggcaccagggg
gtgattggcattctggcctcacgcctgaaggagcgttaccaccgcccgaccattgctttc
gccgatgcaggggagggcatgctcaaggggtcggcgcggtcggtggcggggctgcatatt
cgtgatgcgctggatgcggtggcggcgcggcacccggcgttgatcagcaagtttggcggg
cacgccatggcggcgggtttgtcgctgccggccgagcatttcccggcgtttgccgaggcc
ttcgatgaggaggttcggcgccagctgcgcgaagaggacctgactgggcggttgctgtcg
gatggcacgttggcggtggaggagttccacctggacctggcgcgggccctgcgcaatgcc
gggccttgggggcagcactttcccgagccgttgttccatggggtgttccagctggtcgag
cagcgggtcgtgggagagcggcacttgaaggtggtgctcaagagcgagtgcgggtcggtg
cggctggatgggattgccttcgggatcgaccgggaggtgtggccgaaccctaccgtgcgt
tgggtggagttggcttacaagctggatgtgaatgagtttcgtgggaatgagagtgtgcag
ttgatgattgcgcatatggaggcgcggtag
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