Pasteurella multocida subsp. multocida HN06: PMCN06_0361
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Entry
PMCN06_0361 CDS
T01776
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmv03019
]
PMCN06_0361 (cafA)
03009 Ribosome biogenesis [BR:
pmv03009
]
PMCN06_0361 (cafA)
Messenger RNA biogenesis [BR:
pmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PMCN06_0361 (cafA)
Ribosome biogenesis [BR:
pmv03009
]
Prokaryotic type
rRNA processing factors
PMCN06_0361 (cafA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AFF23616
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Position
377065..378540
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AA seq
491 aa
AA seq
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MDSVELLVNVTPSETRIALVDMGILKEVHIERQAKRGIVGNIYKGRVTRVLPGMQSAFVD
IGLEKAAFLHASDIVSHTECVEESEQKQFVVKDIAELVREGQDIVVQVVKDPLGTKGARL
TTDITLPSRYLVFMPENSHVGVSQRIESEEERARLKELVLPLCDELGGFIIRTAADGATE
EELKQDADFLKRLWRKVLERRAKYPTKSMLYGELALTQRILRDFIGAGLEKIRIDSKLCF
TEVKQFTEEFMPTLVDKLVLYSGNQPLFDVYGVEAAIQTALNKRVNLKSGGYLIIEQTEA
MTTIDINTGAFVGHRNLEETIFNTNIEATKAIAQQLQLRNLGGIIIIDFIDMQTDDHRVR
VLESLQEALSKDRVKTSVNGFTQLGLVEMTRKRTRESLEHVLCGDCPACEGRGRIKTVET
VCYEIMREIIRVHHLFASEQFVVYASRAVADYLINEESHGLLAELEVFIGKQVQIKTEVY
YNQEQFDVVVM
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggattctgttgagctgttagtgaatgtcacaccgagtgaaacacggattgccttagtc
gatatggggatcttaaaagaggtacatattgagcgtcaggcgaaacgtggtattgtgggt
aatatttataaagggcgtgttacaagagtattgccgggtatgcaatcggcatttgtggat
attggtttagaaaaagccgcttttttgcatgcttcagatattgtttcacacactgaatgt
gtggaagaaagcgagcaaaagcagtttgtagtgaaagacattgcggaactggtacgtgaa
ggacaagatattgtagtacaagtggtgaaagatcctttaggcaccaaaggggcacggtta
accacagatatcactttgccttcacgttacttagtgtttatgcctgaaaatagccatgta
ggggtatcacaacggattgaaagtgaagaagaacgcgccagattgaaagagttagtcctg
ccgctttgtgatgaacttggtggttttattatccgtactgcagccgatggtgcaacagaa
gaagaacttaaacaagatgcagattttttaaaacgtttatggcgtaaggtcttagaacgt
cgggcaaaatacccaacaaaatccatgttatatggtgagcttgcattaacccaacgcatt
ttacgtgattttatcggggcgggattagaaaaaattcgtattgactcgaaattatgtttt
acggaagtgaagcaatttactgaggaatttatgccgacgttggtggataagttggtgttg
tattcggggaatcagcctttgtttgatgtgtatggcgtggaggcggcgattcaaaccgcg
ttaaataaacgggttaatttgaaatctggtggctatttaatcattgagcaaaccgaagcc
atgaccactattgatattaatacgggggcatttgtagggcatcgtaacctcgaggaaact
atttttaataccaatattgaagcgacaaaagccattgcccagcagcttcaattacgtaat
ctcggtgggattatcattattgattttattgatatgcaaaccgatgatcaccgtgttcgt
gtattagaatccctgcaagaagcactctctaaagaccgtgtcaaaacgagcgtaaatggc
tttacacaattaggtttggtagaaatgacgcgtaaacgaacacgtgaaagtttagaacat
gtgttatgtggcgattgccctgcttgtgagggacgtggacgtatcaaaacagtggaaacc
gtctgctacgaaattatgcgtgagattattcgtgtacaccatttatttgccagtgagcaa
tttgtggtctatgcctcaagggctgtggcagattatctcatcaatgaagaatcgcatggg
ttattagctgagttagaagtctttatcggcaagcaagttcaaatcaaaacagaagtgtat
tataaccaagagcagtttgatgtagtggtgatgtaa
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