KEGG   Pasteurella multocida subsp. multocida HN06: PMCN06_0776Help
Entry
PMCN06_0776       CDS       T01776                                 

Gene name
dacB
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase/endopeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
pmv  Pasteurella multocida subsp. multocida HN06
Pathway
pmv00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:pmv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PMCN06_0776 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pmv01002]
    PMCN06_0776 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmv01011]
    PMCN06_0776 (dacB)
Enzymes [BR:pmv01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     PMCN06_0776 (dacB)
   3.4.21  Serine endopeptidases
    3.4.21.-  
     PMCN06_0776 (dacB)
Peptidases and inhibitors [BR:pmv01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   PMCN06_0776 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:pmv01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   PMCN06_0776 (dacB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S13 Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID: AFF24025
LinkDB All DBs
Position
834154..835617
Genome map
AA seq 487 aa AA seqDB search
MYKISSFFTATLLRLFKRTILICSLLVSHFSYADIDLAEINAHLPEGASLGFVAKNLNRN
EKIVAHQANTFMLPASTQKVLTALTAKLVLSDQFQFETSLLTNGKIKNNEMHGDLIVRFT
GDPDLTSGQLYQLFTQLKKQRIQKISGDIILDTSVFSSHDRGLGWIWNDLTMCFNAPPAA
VNIDNNCFYVELDANYAPGEQAKIHVPAQYPVQVFGQVYISTPKEAGYCQLDATVLDNNR
YQLKGCLPRQNKPFGLSFAIQDPNAYAATIIQRHLKKLGIAFNGKIKQPYQTPKGQLLAQ
HLSKPLPDLIKKMMKKSDNQIADALFRTIAYQYYQRPASFPLASQAMRQILQTKAGIKFG
HAIIADGSGLSRHNLLSADILLQALEYIAKHEAQLQLMDTFPIAAVDGTLTGRGSLIHEP
LAKNLIAKTGALKGVYNLAGFMTNKKGEKVAFVQFINGYSTGDFERKTKRAPLVQFESQI
YNRLYEH
NT seq 1464 nt NT seq  +upstreamnt  +downstreamnt
atgtataaaatatcttctttttttactgccacgcttttacgccttttcaaacgaacgata
cttatatgtagtttactcgtcagtcatttcagttatgcagatattgatcttgctgaaatc
aacgctcatttacccgaaggtgccagcctaggttttgttgctaaaaacttaaatcgtaat
gaaaaaattgtagcgcaccaagccaacacctttatgttgcccgccagtacacaaaaagta
ctcaccgccttaaccgccaaactcgtactaagtgaccaatttcaatttgaaaccagttta
ttaaccaatggaaaaataaaaaacaatgaaatgcatggcgatcttatcgtacgttttaca
ggtgaccccgatctcaccagtggtcaactttaccaacttttcacccagttaaaaaaacaa
cgtatccaaaaaatcagtggagatattatcttagacacctcagtatttagcagtcatgat
cgtggtttaggttggatttggaatgatttaaccatgtgttttaacgcgcctcccgctgca
gtgaatattgataataactgtttttatgttgagttagatgcgaattatgcaccaggtgag
caagctaagatccatgttcctgcgcaatatcctgtacaggtttttggtcaagtctatatt
tcaacgcctaaagaggccgggtattgccaacttgatgctaccgtacttgataataatcgt
taccagttaaaaggatgcttaccacgccaaaacaaaccttttggtctcagttttgcgatc
caagatccgaatgcctatgctgcaactattattcagcgacaccttaaaaaactaggaatt
gcttttaatggtaaaatcaaacagccttatcagacacccaaaggacaattattagcacaa
cacctatctaaacccttacctgatttaatcaaaaaaatgatgaaaaaatcagataatcaa
attgccgatgccttattccgtactatcgcttatcaatactatcagcgccccgcttcattt
cctttggctagccaagcaatgcgacaaattttacaaaccaaagcaggaattaaatttggt
catgccattattgcagatggctccggcttatcacgccataatttactctctgcggatatt
ttattacaagcattagaatatattgcaaaacatgaagcgcagttacagctcatggatacc
tttccaattgcagctgtggatggcacattaacggggcgaggttctctcattcatgagccc
ttagcgaaaaatttaattgccaaaacaggcgccctcaaaggggtatataatctcgccggc
tttatgaccaataaaaaaggggaaaaagtggcttttgtgcaatttattaatggctattct
actggcgactttgagcgtaaaacaaaaagggcgcctttagttcaatttgaaagccaaatc
tacaatcgcctttatgagcactaa

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