KEGG   Persephonella marina: PERMA_0607
Entry
PERMA_0607        CDS       T00870                                 
Name
(GenBank) probable endonuclease III (DNA-(apurinic orapyrimidinic site) lyase)
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pmx  Persephonella marina
Pathway
pmx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pmx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PERMA_0607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmx03400]
    PERMA_0607
Enzymes [BR:pmx01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PERMA_0607
DNA repair and recombination proteins [BR:pmx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PERMA_0607
 Prokaryotic type
     PERMA_0607
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 DUF2400 RecR_HhH DUF763
Other DBs
NCBI-ProteinID: ACO04723
UniProt: C0QUN1
LinkDB
Position
562437..563096
AA seq 219 aa
MSREDFIKVLNILKREFPRWDAPVVSLMAKRDKRTPYQILISTIISLRTKDQVTAEVSER
LFRLADNPYDMLKIPEEKIAEAIYPAGFYRNKAKVIKEISGKIVKDFGGKVPDSIDELLK
LKGVGRKTANLVVALGYGKPAICVDTHVHRISNRLGFVKTKTAEETEMALRKKVPREYWN
EINDLFVAFGQTICKPVSPKCSECPVSSYCEKVGVKKHR
NT seq 660 nt   +upstreamnt  +downstreamnt
ttgagcagagaggatttcataaaggtcttaaatatcctgaagagggagtttcccagatgg
gatgctcccgttgtatctctaatggcaaaaagggataaaagaactccataccagatactt
atatcaacaataatcagtctcagaacaaaagatcaggtaacagcagaggtttctgagaga
cttttcaggcttgctgacaatccttacgatatgcttaagatacctgaagagaagatagca
gaggccatatatcctgccggattttacagaaataaggctaaggttataaaggagatatcg
ggaaagatagtaaaggattttggaggaaaggttcctgacagtattgatgagcttctgaaa
ttaaaaggagttggaagaaaaacggcaaaccttgttgttgcccttggatacggaaaaccg
gcgatatgtgttgatactcatgttcatagaatatcaaacagattaggctttgttaaaaca
aaaacagctgaagagacagagatggctttaagaaaaaaagttcccagggagtactggaac
gagataaacgatctttttgttgcctttggacagaccatatgcaaacctgtctcacctaaa
tgttcagaatgtccagtatcgtcttactgcgaaaaggttggtgttaaaaaacacagatga

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