Pseudomonas mendocina ymp: Pmen_0609
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Entry
Pmen_0609 CDS
T00510
Name
(GenBank) hydroxymethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00730
Thiamine metabolism
pmy01100
Metabolic pathways
pmy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Pmen_0609
Enzymes [BR:
pmy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Pmen_0609
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABP83377
UniProt:
A4XPW1
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All DBs
Position
complement(670217..672100)
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AA seq
627 aa
AA seq
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MSAQQQKNLSESAQVDQQSVQPFPRSQKVYVQGSRPDIRVPMREISLDVTPTDFGGEINA
PVTVYDTSGPYTDPNVTIDVRKGLSDVRSAWIEDRGDTEKLPGLSSEFGQRRLNDAELSA
MRFAHVRNPRRARAGHNVSQMHYAKKGIITPEMEFVAIRENMKLAEAREAGLLNEQHAGH
SFGASIPKEITPEFVRSEVARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALGSS
IEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGIAE
DLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHK
ENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKHDV
QCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWF
GCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFR
WEDQFNLGLDPDTARAFHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVRDYAKEQRIDA
VDLDAEQGMQAKAAEFKAQGSQLYQKV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacaacaacaaaagaacctgagtgaatcggctcaggtcgatcagcagtcggta
caaccctttccccgttcgcagaaggtctatgtccaaggctcgcgcccggacatccgcgtg
ccgatgcgcgaaatcagcctggacgtgacgccgaccgacttcggtggcgagatcaacgcc
ccggtcaccgtctatgacacctccggcccctacaccgacccgaacgtcaccatcgacgtg
cgcaagggcctgagtgatgtgcgcagcgcctggatcgaggatcgcggcgacaccgagaag
ctgccgggcctatcctccgagttcggccagcgccgtctgaacgacgccgagctgtcggcc
atgcgcttcgcccacgtgcgcaacccgcgccgggcccgcgccgggcacaacgtcagccag
atgcactacgccaagaaaggcatcatcacgccggagatggagttcgtcgccatccgcgag
aacatgaagctggccgaagcccgcgaagccggcctgctcaatgagcagcacgccggccac
agcttcggcgccagcatcccgaaggaaatcacccccgagttcgtgcgcagcgaagtcgcc
cgcggccgcgccattattccggccaatatcaaccacgtggagctggagccgatgatcatc
ggccgcaacttcctggtgaagatcaacggcaatatcggcaacagcgccctgggctcctcc
atcgaggaagaagtggccaagctgacctggggcatccgctggggctcggacacggtgatg
gacctgtccaccggcaagcatatccacgagacccgcgagtggatcatccgcaactcgccg
gtgccgatcggcaccgtgccgatctaccaggcgctggagaaggtcggcggcatcgccgag
gacctgacctgggagctgttccgcgacaccctgatcgaacaggccgaacagggcgtggac
tacttcaccatccacgccggcgtgctgctgcgctacgtgccgctgaccgccaagcgcgtc
accggcatcgtcagccgcggcggctcgatcatggccaagtggtgcctggcgcatcacaag
gaaaacttcctctacacccatttcgaagacatctgcgaaatcatgaaggcctacgacgtg
tccttctccctgggtgacggcctgcgccccggctccatcgccgatgccaacgacgccgcg
cagttcggcgagctggagaccctcggcgagctgaccaagatcgcctggaaacacgacgtg
cagtgcatgatcgaaggccccggccacgtgccgatgcagctgatcaaggagaacatggac
aagcagctggaatgctgcgacgaggcaccgttctataccctcggcccgctgaccaccgat
atcgcccccggctacgaccacatcaccagcggcatcggcgcagcgatgatcggctggttc
ggctgcgccatgctctgctacgtcacgcccaaggagcacctgggcctgccgaacaaggat
gacgtgaagaccggcatcatcacctacaagatcgcggcccacgcagcggacctggccaag
gggcacccgggcgcgcagattcgcgacaacgccctgtccaaggcgcgcttcgagttccgc
tgggaagaccagttcaacctgggcctggacccggacaccgcgcgtgccttccacgacgag
acgctgcccaaggactcggccaaggtggcgcacttctgctccatgtgcgggccgaagttc
tgctcgatgaagatcacccaggaggtgcgcgactatgctaaggaacagcgtatcgacgcc
gtcgacctggacgccgaacagggcatgcaggccaaggcggcggagttcaaggcgcagggc
agtcagctgtaccagaaggtctga
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