Pseudomonas mendocina ymp: Pmen_1116
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Entry
Pmen_1116 CDS
T00510
Name
(GenBank) transcriptional regulator, LysR family
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
pmy
Pseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmy03000
]
Pmen_1116
03036 Chromosome and associated proteins [BR:
pmy03036
]
Pmen_1116
Transcription factors [BR:
pmy03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Pmen_1116
Chromosome and associated proteins [BR:
pmy03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Pmen_1116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_AsnC-type
MarR_2
HTH_24
Sigma70_r4
Cro
HTH_34
Motif
Other DBs
NCBI-ProteinID:
ABP83883
UniProt:
A4XRB7
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Position
1255146..1256039
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AA seq
297 aa
AA seq
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MFDYKLLAALAAVVEQAGFERAAQVLGLSQSAVSQRIKLLEARVGQPVLVRATPPAPTEI
GRRLLNHVQQVRLLERDLQGQVPGLDEQALPERLRIAINADSLATWWALATAEFCATRQV
LMELVVEDQEVGLKRMRAGEVAGCVCAAERPVAGARSVALGAMRYRALASPGFVARHFAA
GVTAEALARAPAIVFGPDDQLQHRYLAGLGVTGGFAYHLCPSSEGFVRLTEGGLGWGLVP
ELQVRDELAGGRLVELVPERFIDVPLYWHHWRNGGELLAGLTEHLRRAAGGALVQAS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgattacaaattgctagccgccctggcggcagtggtggagcaggccggtttcgag
cgcgcggcgcaggtgctgggcctgtcgcagtcggcggtgtcgcagcgcatcaagctgctc
gaagcgcgggtcggccagccggtgctggtgcgcgcgacgccgccggcgcccactgaaatc
ggtcggcgtctgctcaaccatgtgcagcaggtgcgcctgctcgaacgcgatctgcagggg
caggtgccggggctggatgaacaggcgctgcccgagcgtctgcgcatcgccatcaatgcc
gacagcctggcgacctggtgggcgctggcgacggcggagttctgcgcgacccggcaggtg
ctgatggagctggtggtggaggaccaggaggtcggcctcaagcgcatgcgcgccggcgag
gtggccggctgcgtgtgcgccgccgagcgcccggtagccggcgcgcgcagcgtcgccctg
ggggcgatgcgctaccgtgcactggccagcccgggcttcgtcgcccggcattttgctgcc
ggggtcacggccgaggcgctggcgcgggcgccggccatcgtcttcggcccggacgatcag
ttgcagcatcgctacctggccggcctgggggtgaccggtggcttcgcctatcacctgtgt
ccttcctccgaaggattcgtgcgcctgaccgaaggcggtctgggctggggcctggtgccg
gaactgcaggtgcgtgacgaactggccggcggcaggttggtggagctggtgcccgagcgc
ttcatcgacgtgcctttgtactggcatcactggcgcaatggcggtgaactgctggccggg
cttaccgagcacctgcgccgcgcagccggcggcgcgctggtgcaggcgtcgtag
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