Pseudomonas mendocina ymp: Pmen_4284
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Entry
Pmen_4284 CDS
T00510
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K20998
polysaccharide biosynthesis protein PslE
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
Pmen_4284
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Gene cluster
GFIT
Motif
Pfam:
GNVR
Wzz
SidC_N
DUF3244
Motif
Other DBs
NCBI-ProteinID:
ABP87031
UniProt:
A4Y0B5
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All DBs
Position
complement(4689008..4691002)
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AA seq
664 aa
AA seq
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MIEIRTFRDLLRLFFIFFREFKLAVIATLVVVLLGAFLLPTSYESSARLLIKPGRETSTL
PIEMADRQAIVMPGAMRDPILDEERMLTGRPISRQVAERYLEQLANAPKPDGFFAAIKYG
VGQVANGAVELVRGFLQLIGLTEKQTPVDRLATKLEKKFSVTHASGSSVMEISFRWSDPV
VAQAVVQSWVELYMQERTRALGRKSLYDFYLTQSQASEKEILGYKQQLADKLNELGAVSI
DEHLQDLAERINQLRSDRFYTSRLISSTEGSLATLAQQIQGLPKEVSTVRELSLNPVHQN
LVRMLNDKRAERQDLLRTFTENAPPVKSIDENILYLEQMVKAEAATVQASQNLAPNPIAE
RLRSNLMDQQADLARLKAQLLRQDGHLEKLEQDRARALAAEPELARLQRVLTAAERNFAL
YNESLEKARIDRELDDSRISNIAIIEHATLNPSRVFPKSLLMIFLALPLSVLVGLLVLYL
CYLLDQRIHDGGRIEERFSVPLWTTLPEIEEGKPGQNTAFLAALYRLYGQLPLERIEQQG
LTFGLTSARRGEGVSFIVEHLAKLLAERGLKVRVDGEQPCQAGEVVLLDASGLLSNPQAF
VQLRRADLIALVVEAQKSTVPTVEHALGVLSTAFGKVDGVIINRRRFEVPTRVLQLIATA
RGAV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattcgtacattccgtgatctgttgcgcctgttctttatcttctttcgggag
ttcaagctggcggtaatcgcaaccctggtggtggttctcttgggcgcgtttctgctgccc
acttcctatgaatccagcgcgcgcctgctgatcaagccgggacgggaaaccagcaccctg
cccatcgagatggccgaccgccaggcgatcgtcatgcccggagccatgagagatcccatt
ctcgatgaagaacgcatgctgaccggccgaccgatcagtcggcaggtggccgagcgctac
ctcgaacagctggccaacgcgccgaaacccgatggtttctttgccgccatcaagtatggc
gtgggccaggtggccaatggcgcggtggagctggtgcgcggttttctgcagctgatcggc
ctgacggagaagcagacgccggtcgatcgtctggccaccaagctggagaagaagttcagc
gtgacgcacgccagtggctcgtcggtgatggagatcagctttcgctggagcgacccggtc
gtggcgcaggcggtggtgcagagctgggttgagctgtacatgcaggagcgtactcgagcc
ctgggccgcaagagcctgtatgacttctatctgacccagagccaggccagcgagaaggag
attctcggctacaagcagcagctggccgacaagctcaacgagctgggggcggtgagcatc
gacgagcacctgcaggacctggccgaacgcatcaaccagctgcgcagtgaccgcttctac
acatcgcgcctgatctcctccaccgagggcagcctcgccaccctcgcccagcagatccag
gggctgccaaaggaagtcagtacggttcgcgagctgtcgctcaaccccgtgcaccaaaac
ctggtgcgcatgctcaacgacaagcgtgccgagcgtcaggacctgcttcgcaccttcacc
gagaatgcgccgccggtgaagagcatcgacgagaacattctctacctggagcagatggtc
aaggccgaggccgcgaccgtgcaggcttcgcagaacctcgctccgaaccccatcgccgag
cgtctgcgcagcaatctcatggatcaacaggccgacctcgcccgtctcaaggcgcagcta
ctgcgccaggacggtcatctggaaaagctcgagcaggaccgtgccagggctctggcggcc
gaaccggagctggcgcgcttgcagcgcgtactgaccgctgcagagcgaaacttcgcgctc
tacaacgagagcctggaaaaagcccgcatcgatcgggaactggacgacagccgcatcagc
aacatcgccatcatcgagcatgcgacgctcaacccgagtcgggttttccccaagagcctg
ttgatgattttcctggcgttgccgctgagcgtgctggtcggcttgctggtgctctatctc
tgctacctgctcgatcagcgtattcatgatggggggcgcatcgaagagcgcttctccgtt
ccgttgtggaccaccctgcccgagatagaggaaggcaagccggggcagaacaccgccttc
cttgcggccttgtatcgtttgtatggtcagttgccgctggagcgtatcgagcagcagggg
ctgacctttggcctgacgtccgctcgccgcggcgaaggcgtcagcttcatcgtcgagcat
ctggccaagctgctggccgaacgcgggctgaaggtgcgcgtcgacggtgagcagccatgc
caggctggcgaagtcgtgctgctcgatgcctccggcctgctgtccaacccgcaagccttc
gtgcagttgcgccgcgccgacctgattgccctggtggtggaagcacagaagagcacggtt
ccgaccgtcgagcatgcgctgggtgtgctctccacggcgtttggaaaggtcgatggcgtg
atcatcaatcgccgccgcttcgaagtgccgacgcgggtgctgcaactgatcgccacagcc
agaggcgccgtttga
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