Polaromonas naphthalenivorans: Pnap_1635
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Entry
Pnap_1635 CDS
T00459
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pna
Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pna03016
]
Pnap_1635
Enzymes [BR:
pna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Pnap_1635
Transfer RNA biogenesis [BR:
pna03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Pnap_1635
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ABM36949
UniProt:
A1VMS1
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All DBs
Position
complement(1723654..1724166)
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AA seq
170 aa
AA seq
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MNDTARLFLALWPSPRVRAALLDYRDAWHWDSQASLVKPEQLHLTLHFIGNVARYRLEPL
IKGLAVPFKPFELKFGHSGLWRHGIAVLQPQAIPASLLQLHGALGLALQGLELPVEKRES
FRPHITLARHAADAVPPAQESRLRWRVRGYALVESCREPAGKYRLVQRYG
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccgcccgactatttctggcgctttggccttcgcctcgcgttcgggctgcc
ttgcttgattaccgcgatgcatggcactgggacagtcaggcgtcactggtgaagccagag
cagctgcacctgaccctgcactttatcggcaatgtcgcacgctaccgcctggagccgctc
atcaaaggactggcggtcccgttcaagccttttgaactgaaatttggccactccggccta
tggcgccacggcattgccgtgttgcagccgcaggccatccccgccagcctgctgcagttg
catggcgcattgggcctggccctgcaaggccttgaactgccggtcgaaaaacgggagagc
tttcgtccccatatcacgctcgcgcgccatgcagccgatgcagtgccacccgcacaggag
tccaggctgcgctggcgtgtgcggggctatgcactggtggagtcctgccgtgaaccggcg
ggcaagtatcgcctggtacagcgttacggctaa
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