Polaromonas naphthalenivorans: Pnap_2194
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Entry
Pnap_2194 CDS
T00459
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pna
Polaromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pna03400
]
Pnap_2194
Enzymes [BR:
pna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pnap_2194
DNA repair and recombination proteins [BR:
pna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Pnap_2194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABM37502
UniProt:
A1VPC4
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All DBs
Position
complement(2340316..2342883)
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AA seq
855 aa
AA seq
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MPLSSSPQPADTAVSVAARCWHQAMRRLAEIIASRGLHPSEVVVLLPYAQLIQQARQTWA
DNAGGTFFVPRFETTMNWATGLGGTLGMFTPSGVDLRMDVSVDMLTAASLLGQAGLAAQQ
DALAGRLVESAWSLARVAASVLPAERQAWSESLAEALGVGLDSPVLALEAAVGRIALAWV
AASGYASDRLFQAEPALLVVVEGFQVEPVNEALKLHFGERALSIALCLPEDEPDRPGAPQ
PSLHAALDDEDEAARAAACVLAHLAQGRSPVALIAQDRQLTRRVAAMLARRGIAMRDETG
WKLSTSRAAASLMGLLRALPWDVSTDAVLDWLKNAPAFASGTVTAAETEVRKFGVRAWRD
LPAAPLEALAVAQPLARQVNQLRDSLSRPRPLAAWLRDLRAALQSAGQWELLASDEAGQR
VLDVLRLHEGADIEFEDAPAMKLREFTSWVNQALEAQTFSPEHPAAEQVVILPLAQLLGR
AMQAVVLPGCDEIRLPVSPEPPGQWTPGQRELLGLPSREALARVARQAWDYTLQLPHVDL
LWRTSEAGEHLMPSGFVQEILLSRSLAADRAGDPRRLRAVAACPTLRPLPTGEALPVRRL
SASSYGDLRACPYRFFALRQLGLHESDELESELGKRDFGNWLHNLLCRFHEALKEAPAHD
LPARIAMINVAAEQAAKELGLSHSEFLPFAAAWTPVRDGYLAWLAGHEATGARFDMAEQW
LDMPLGSELTLIGKIDRMDRLPGGELLLIDYKTEPRATTAERIKNGLEDSQLAFYAALVA
DDTLGAAYVNLGEKEPTRSYDQPDIVALRDALIDGILSDMARIAEGAPLPALGEGKACDY
CAARGLCRKDFWSEP
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgcccctttcttcttccccccagcctgccgatacggcagtctccgtggctgcccgctgc
tggcaccaggccatgcggcggctggccgaaatcattgcttcgcgcggcctccatccttcc
gaggtggtcgtgctgctgccgtatgcccagctgatccagcaggcgcgccagacctgggcc
gacaacgccggcggcaccttttttgttccgcgctttgaaaccaccatgaactgggccacc
ggcctgggcggcacgctgggcatgttcacgccgtcgggtgtcgatctgcgcatggatgtg
tcggtggacatgctgacggccgcgtcgctgctgggtcaggccgggctggccgcgcagcag
gatgcgctggccggccggctggtcgagtccgcctggagcctggcccgcgtggccgccagc
gtgctgcccgccgaacgccaggcctggagcgagtcgctcgccgaggcgctgggcgtgggc
ctggattcgccggtgctggcgctggaggcggccgtcgggcgcatcgcgctggcctgggtc
gcggcctctggctatgcatcggaccggctgttccaggccgagccggcgctgttggtggtg
gtcgagggctttcaggtcgagccggtgaacgaggcgctgaagcttcattttggcgagcgg
gcgctgtcgattgcgctgtgccttcccgaggacgagccggaccggcccggcgcgccacag
ccctcgctgcatgccgcgctggacgacgaggacgaggccgcacgcgccgccgcctgcgtg
ctggcgcacctggcgcaggggcgcagcccggtcgcgctgatcgcgcaggaccgccagctg
acccgccgggtggccgccatgctggcccggcgcggcatcgccatgcgcgatgaaaccggc
tggaagctgtccacctcgcgcgcggcggccagcctgatgggcctgctgcgcgccttgccc
tgggacgtatcgaccgacgccgtgctcgactggctgaaaaatgccccggcctttgcctcc
ggcaccgtcacggcggccgaaaccgaggtgcgcaagttcggcgtgcgcgcctggcgcgac
ctgccggccgcgccgctggaggcgctggccgtcgcccagcctttggcgcggcaggtcaac
cagttgcgcgacagcctgagccgtccgcgcccgctggccgcctggctgcgcgacctgcgc
gccgcgctgcagtcggccggacagtgggaactgctcgccagcgacgaagccggccagcgg
gtgctcgatgtgctgcgcttgcatgagggcgccgacatcgagttcgaagacgcgccggcc
atgaagctcagggagttcaccagctgggtcaaccaggcgctggaagcgcaaaccttctcg
cccgagcacccggcggccgagcaggtggtgatcctgccgctggcgcagttgctgggccgg
gccatgcaggccgtggtgctgcccggctgcgatgaaatccgcctgccggtgtcgcccgag
ccgcccggccagtggacgcccggccagcgcgaactgctcggcttgccgtcgcgcgaagcg
ctggcccgcgtggcccggcaggcgtgggactacaccctgcaactgccccatgtggacctg
ctgtggcgcaccagcgaagccggcgagcacctgatgcccagtggtttcgtgcaggaaatt
ctgctcagccgcagcctggcggcggaccgggccggcgacccgcgccgcctgcgcgccgtg
gcggcctgcccgacgttgcggccgctgcccacgggcgaggccttgcccgtcaggcggctg
tcggccagcagctatggcgatttgcgcgcctgtccctaccgtttttttgcgctgcgccag
ctcggcctgcacgaatccgacgaactggaaagcgaactcggcaagcgtgatttcggcaac
tggctgcacaacctgctctgccgcttccatgaagcattaaaagaggctcccgcgcacgac
ctgcctgcacgaatagctatgattaatgtagcggcagaacaagccgccaaagagcttggc
ctgagccacagcgaattcctgccgtttgccgccgcctggactccggtgcgcgacggctac
ctggcctggctggccggacacgaagccacgggtgctcgcttcgacatggccgagcagtgg
ctggacatgccgctgggcagcgagttgacgctgatcggcaagatcgaccgcatggaccgg
ctgccgggcggcgagctgctgctgatcgactacaagaccgagccgcgcgccaccaccgcc
gagcgcatcaaaaacggcctggaagactcgcagctggcgttctacgccgccctggtggcc
gacgacacgctgggcgccgcctatgtgaacctgggcgaaaaagagccgacccgcagctat
gaccagcccgacatcgtcgccctgcgcgatgccctgatcgacggcatcctgagcgacatg
gcccgcattgccgagggtgcgccgctgccggcgctcggcgaaggcaaggcctgcgactac
tgcgcggcacgcggcctgtgccgaaaagacttctggagtgaaccatga
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