KEGG   Polaromonas naphthalenivorans: Pnap_3415Help
Entry
Pnap_3415         CDS       T00459                                 

Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pna  Polaromonas naphthalenivorans
Pathway
pna00473  D-Alanine metabolism
pna00550  Peptidoglycan biosynthesis
pna01100  Metabolic pathways
pna01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pna00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    Pnap_3415
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Pnap_3415
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Pnap_3415
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pna01011]
    Pnap_3415
Enzymes [BR:pna01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Pnap_3415
Peptidoglycan biosynthesis and degradation proteins [BR:pna01011]
 Precursor biosynthesis
  Amino acid ligase
   Pnap_3415
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATPgrasp_ST ATP-grasp_4 TTL RimK CPSase_L_D2 ATP-grasp GARS_A
Motif
Other DBs
NCBI-ProteinID: ABM38712
UniProt: A1VST4
LinkDB All DBs
Position
complement(3620734..3621711)
Genome map
AA seq 325 aa AA seqDB search
MSPNPSSFGKVAVLMGGRSAEREISLMSGSGVVQALRSQGIDAHAFDPAERDLGELKTGG
FARCFIALHGRFGEDGTVQGALELLGIPYTGSGVMASSMAIDKVMTKRLLLSESLPTPRY
VLLRRGGYSPAQVDAIVDTLGLPLIVKPAREGSSLGLSKVTERAAMAAAVALAEKMDADI
LCEQFISGDEVTCPVLGTGEQARALPVIRIVAPEGNYDYQNKYFTDTTQYLVPCGLPAGE
EAAIQQLVLQAFRTLNCRGWARADVMIDQATRKPYLLEINTSPGMTGHSLVPMSARAAGI
SYEALCVEVLKTALLDHQPRDGSLP
NT seq 978 nt NT seq  +upstreamnt  +downstreamnt
atgagcccgaatccctccagttttggcaaggtcgccgtcctcatgggcgggcgctccgcc
gagcgtgaaatttcgctgatgtcaggaagcggcgtggtgcaggcgctgcgctcgcaaggc
attgatgcccatgccttcgatccggccgagcgcgacctgggcgagctgaaaacgggcggc
tttgcgcgctgtttcatcgcgctgcatggccgcttcggcgaagacggcacggtgcagggc
gcgctcgaactgctcggcattccctacaccggctcgggcgtcatggcgtcgagcatggcg
attgacaaggtcatgaccaagcgcctgctgctgtccgaaagcctgcccacgccgcgctat
gtgctgctgcgccggggcggctatagcccggcacaggtcgatgccatcgtcgatacgctg
ggcttgccgctgatcgtcaagcccgcgcgcgaaggctcatcgctgggcctgagcaaggtc
accgaacgagctgccatggccgcagccgtcgcgctggccgaaaagatggatgccgacatt
ctctgcgagcagttcatcagcggcgacgaagtgacctgcccggtgctgggcaccggcgag
caggcgcgggcgctgccggtgatccgcatcgtggcgcccgagggcaactacgactaccag
aacaaatacttcaccgacaccacgcaatacctggtgccctgcgggctgcccgccggcgag
gaagccgccatccagcaactggtgctgcaggcctttcgcacgctcaactgccgtggctgg
gcacgcgccgatgtgatgatcgaccaggccacgcgcaagccctacctgctggagatcaat
acctcgcccggcatgaccgggcactcgctggtgccgatgtccgcacgggcggccggcatt
tcctatgaagcgctgtgcgttgaagtgctgaaaaccgcattgctcgaccaccagccccgg
gatggaagcctgccgtga

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