Polynucleobacter necessarius: Pnec_1315
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Entry
Pnec_1315 CDS
T00683
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pne
Polynucleobacter necessarius
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pne03032
]
Pnec_1315
03400 DNA repair and recombination proteins [BR:
pne03400
]
Pnec_1315
Enzymes [BR:
pne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pnec_1315
DNA replication proteins [BR:
pne03032
]
Prokaryotic type
DNA Topoisomerases
Pnec_1315
DNA repair and recombination proteins [BR:
pne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pnec_1315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
ACB44435
UniProt:
B1XVQ8
LinkDB
All DBs
Position
complement(1138272..1140980)
Genome browser
AA seq
902 aa
AA seq
DB search
MEQAAKETLPISLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMYELNNDWN
RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRLRKIAHELLADLDKETVDFGPNYDGSEKEPLILPAKVPNLLINGSSGIAVGMAT
NIPPHNLDEVVTACLHVLHNPECTIDELIEIIPAPDFPTAGIIYGVQRVREGYRTGRGRV
VMRAKTHFEDLDKGTRQAIIVDELPYQVNKKNLLERIAELVNEKKVEGISDLRDESDKSG
MRVVIELKRGEVPEVVLNNLYKSTQLQDNFGMNMVALVDNQPRLLNLKQMLEYFLQHRRE
VVTRRTIFELRKARDRGHALEGLAVALANIDEFIAIIKAAANPVIAKQELMGKAWDSSMV
REMLARAETDTPGGRNAYRPEGLLPEYGMQTTGLYRLSDSQAQEILQMRLQRLTGLEQDK
IVNEYKEVMAEISDLLDLLAKPERVTQVIEAELKEVQSEFGVAGGDTGRRSFIEVNATEL
FTEDLITPQDLVVTLSNTGYMKSQPLSEYRAQKRGGRGKQAAATKNEDWIETLFVANTHD
TILCFSDRGRMYWLKVWEVPQGSRTSRGKPIVNMFPLIEGEKITVILPIKGYQDNQYVFM
ATSLGTVKKTRLSDFSNPRKAGIIAVDLNENDFLVGAAITDGQHDVMLFSDAGKAVRFDE
NDVRPMGRTARGVRGMNLGEGHQVIAMLVAPAEAAEGVEAAVVDANGIAIPSSVLTATEN
GYGKRTPITEYTRHGRGTKGMIAIQTSERNGKVVAAALVSPEDQIMLITTGGVLVRTRVS
EIREMGRATQGVTLINVDEGTRLSGLQRIAESDSDEDTDDAEGGDISADPATDSNDDTAG
DA
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagccgctaaagaaacactaccaatatccctcgaagacgaaatgcggcggtcc
tatttggactacgcaatgagcgtcatcgtcggcagagccctgccagacgtgcgtgacggc
ctcaaaccggttcaccgccgggtcttattcgcaatgtatgaattaaacaacgattggaac
cgagcttacaaaaaatctgcccgtatagttggcgatgtaatcggtaaataccatccgcac
ggcgattctgcggtgtatgacacgatcgttcggatggcccaggacttctctctgcgctat
atgctggttgacgggcagggtaactttggctccgtagacggcgataacgctgctgcgatg
cggtatactgagatccgtctccggaagattgcccatgagcttttggctgatttggataag
gaaacggtcgattttgggccaaattacgacggtagcgagaaagaacctctgattctgccg
gccaaagtgcctaatttgctgataaacggcagttctggcattgccgtgggtatggcgact
aatattcctccccataacctggatgaggtggttacggcctgtctgcacgtcctgcacaac
ccagaatgcacgattgatgagctcattgagatcattcctgcgcctgatttcccaaccgcc
ggcatcatttatggcgttcaaagggtccgtgagggctatcgcactggtcgtgggcgcgtg
gttatgcgtgccaagactcacttcgaagatttggataagggcacacgtcaagccatcatt
gttgatgagttgccatatcaagttaataaaaagaacttgctcgagcgcattgctgagtta
gtaaacgagaaaaaggttgaaggtatttctgatttgcgtgatgaatcagataagtccggt
atgcgagttgtgattgaactcaagcgtggtgaagtgcctgaagtggttcttaacaatttg
tataagagcactcaactgcaagataacttcggtatgaacatggtggcattggttgacaac
caaccacgcttgttgaacttgaagcaaatgcttgagtacttcttgcaacatcgtcgtgaa
gtagttacacgtcgtacgatttttgaattgcgtaaagcgcgtgatcgcggtcacgccttg
gaaggtttggcagttgcattagcaaacatcgatgagttcattgcgattattaaagctgct
gcgaacccagtgattgctaaacaagagttgatgggtaaagcttgggattcctcgatggtg
cgcgagatgttggcgcgtgctgagaccgataccccaggcggccgtaacgcctatcgccca
gaaggcttgctgcctgagtatggtatgcaaaccactggcttatatcgcttgtcagatagt
caagcgcaagaaattttgcagatgcgtttgcaacgcttgactggtcttgagcaagacaag
atcgttaacgaatacaaagaagtcatggcggagatttctgacttgcttgacttgttagct
aagccagaacgtgtcacacaagtaattgaggctgaacttaaagaagttcaatctgaattt
ggtgttgcaggtggcgatactggtcgtcgttcatttattgaagtgaatgcaaccgaactt
ttcacagaagatttaattacgccgcaagatttggtagtgacactttcaaatactggttat
atgaagagtcagccgctgagtgaataccgcgcacaaaaacgtggtgggcgcggtaagcaa
gctgctgccactaagaacgaagattggattgaaacgctcttcgtggcgaatacgcacgat
acgattttgtgcttctctgatcggggtcgcatgtattggcttaaggtttgggaagttcca
caaggaagtcgtacttcccgtggcaagcctatcgtcaatatgttcccgctgattgagggc
gagaagatcacagtgattctgccaattaagggctatcaagacaatcagtatgtatttatg
gctactagcttgggtactgtgaagaagacgcgcttatccgacttctctaatccacgtaag
gccggcattattgcggttgacttaaacgaaaacgacttcttagttggtgctgcaattaca
gatggtcaacacgacgtgatgttgttttctgacgctggtaaagctgtgcgctttgacgag
aatgatgttcgtccaatgggtcgtacagcacgcggtgtacgaggcatgaacttgggcgaa
ggccatcaagtgatcgctatgttagttgcgccagctgaggctgcagaaggtgttgaggcg
gctgtggttgatgcaaacggcattgcgatcccaagcagtgtgttaactgcaacagagaat
ggttacggcaaacgtacgccaatcactgaatacactcgtcatggtcgcggtaccaagggc
atgattgcgattcagacgtctgagcgtaacggcaaggtagttgctgctgccttggtatcc
ccagaagatcaaatcatgttgattaccaccggtggcgttttggtgcgcacacgcgtttct
gaaattcgtgagatgggtcgcgctactcaaggcgttaccttgatcaacgtggatgagggt
actcgtttgtctggcttgcagcgtattgctgaaagcgattcggatgaagatactgatgat
gcagaaggcggcgatatttctgcggatccagcaaccgattctaatgacgatacggcaggt
gacgcttaa
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