KEGG   Pseudoalteromonas nigrifaciens: PNIG_a1208
Entry
PNIG_a1208        CDS       T05271                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine55 synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
png  Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:png00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:png03016]
    PNIG_a1208 (truB)
Enzymes [BR:png01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     PNIG_a1208 (truB)
Transfer RNA biogenesis [BR:png03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PNIG_a1208 (truB)
 Prokaryotic type
    PNIG_a1208 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: ASM53402
UniProt: A0A379HCB6
LinkDB
Position
I:1101777..1102736
AA seq 319 aa
MAKRSKGRPVDGILLLNKPIGISSNKALQQTKGVYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEIVSTKDVNVTREQLIKEIAAFVGESDQ
YPSMYSALKYQGRPLYKYAREGIEVPRKCRKINVFSLTFDEFDEVNNVIQMTAHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRTAVGQYPAEKMVSLDEIEALLAKAKDEEVAPSTYLDA
LLLPLDTALVDLPVVEISKEQGSIFSHGQAIDLDIDLPEGVIKVVADGIFIGTGERNASG
HLKVKRGLASQQDDYVKPE
NT seq 960 nt   +upstreamnt  +downstreamnt
atggcaaagcgcagtaaaggccgtccagttgacggtattttgttgttaaacaaaccaatt
ggcatttcatcaaataaagcactacagcaaacaaaaggtgtgtactttgcacaaaaggcg
gggcacacaggtgcgctagatccattggcaaccggtatgctgcctatttgctttggtgag
gcaaccaagtttacacagtttttactcgatacagacaaaacctatgtggtacgcgctaaa
ttaggcgagagaacaacgacatcagattctgatggtgaaattgttagcactaaagatgta
aatgtaacgcgtgaacaactgattaaagaaattgccgcttttgttggtgagtcagatcag
tacccgtcaatgtactcggcgcttaagtatcaaggtaggcctttatataagtatgcacgc
gagggtattgaagtaccacgtaaatgcagaaaaataaacgtgtttagcttaacgtttgac
gaatttgatgaagtgaataacgtaatacaaatgacggcgcatgtatctaaaggcacctac
attcgtactattgttgacgacttaggtgaaaagctaggttgtggcgcacacgttattatg
ctgcaccgcactgcggttggtcaatatcctgcagaaaaaatggtgtcgctagatgaaatt
gaagcgttattagcaaaagctaaagacgaagaagttgcaccttctacttatttagacgcg
ttgttattgccactcgatacagctttagttgatttaccggttgttgagataagtaaagag
cagggcagtatttttagtcacggccaagcaatagaccttgatatagatttgcctgaaggc
gtaattaaggttgtagctgacggtatttttattggtacaggcgagcgtaatgccagcggc
catttaaaagttaaacgtggcttggccagccaacaagatgattatgtaaaacccgaataa

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