Pseudoalteromonas nigrifaciens: PNIG_a1208
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Entry
PNIG_a1208 CDS
T05271
Symbol
truB
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
png
Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:
png00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
png03016
]
PNIG_a1208 (truB)
Enzymes [BR:
png01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PNIG_a1208 (truB)
Transfer RNA biogenesis [BR:
png03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PNIG_a1208 (truB)
Prokaryotic type
PNIG_a1208 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASM53402
UniProt:
A0A379HCB6
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All DBs
Position
I:1101777..1102736
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AA seq
319 aa
AA seq
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MAKRSKGRPVDGILLLNKPIGISSNKALQQTKGVYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEIVSTKDVNVTREQLIKEIAAFVGESDQ
YPSMYSALKYQGRPLYKYAREGIEVPRKCRKINVFSLTFDEFDEVNNVIQMTAHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRTAVGQYPAEKMVSLDEIEALLAKAKDEEVAPSTYLDA
LLLPLDTALVDLPVVEISKEQGSIFSHGQAIDLDIDLPEGVIKVVADGIFIGTGERNASG
HLKVKRGLASQQDDYVKPE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcagtaaaggccgtccagttgacggtattttgttgttaaacaaaccaatt
ggcatttcatcaaataaagcactacagcaaacaaaaggtgtgtactttgcacaaaaggcg
gggcacacaggtgcgctagatccattggcaaccggtatgctgcctatttgctttggtgag
gcaaccaagtttacacagtttttactcgatacagacaaaacctatgtggtacgcgctaaa
ttaggcgagagaacaacgacatcagattctgatggtgaaattgttagcactaaagatgta
aatgtaacgcgtgaacaactgattaaagaaattgccgcttttgttggtgagtcagatcag
tacccgtcaatgtactcggcgcttaagtatcaaggtaggcctttatataagtatgcacgc
gagggtattgaagtaccacgtaaatgcagaaaaataaacgtgtttagcttaacgtttgac
gaatttgatgaagtgaataacgtaatacaaatgacggcgcatgtatctaaaggcacctac
attcgtactattgttgacgacttaggtgaaaagctaggttgtggcgcacacgttattatg
ctgcaccgcactgcggttggtcaatatcctgcagaaaaaatggtgtcgctagatgaaatt
gaagcgttattagcaaaagctaaagacgaagaagttgcaccttctacttatttagacgcg
ttgttattgccactcgatacagctttagttgatttaccggttgttgagataagtaaagag
cagggcagtatttttagtcacggccaagcaatagaccttgatatagatttgcctgaaggc
gtaattaaggttgtagctgacggtatttttattggtacaggcgagcgtaatgccagcggc
catttaaaagttaaacgtggcttggccagccaacaagatgattatgtaaaacccgaataa
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