KEGG   Pseudoalteromonas nigrifaciens: PNIG_a2619
Entry
PNIG_a2619        CDS       T05271                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
png  Pseudoalteromonas nigrifaciens
Pathway
png03030  DNA replication
png03430  Mismatch repair
png03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:png00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PNIG_a2619 (dnaQ)
   03430 Mismatch repair
    PNIG_a2619 (dnaQ)
   03440 Homologous recombination
    PNIG_a2619 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:png03032]
    PNIG_a2619 (dnaQ)
   03400 DNA repair and recombination proteins [BR:png03400]
    PNIG_a2619 (dnaQ)
Enzymes [BR:png01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PNIG_a2619 (dnaQ)
DNA replication proteins [BR:png03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PNIG_a2619 (dnaQ)
DNA repair and recombination proteins [BR:png03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PNIG_a2619 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 vATP-synt_AC39
Other DBs
NCBI-ProteinID: ASM54617
UniProt: A0A379H914
LinkDB
Position
I:complement(2376675..2377388)
AA seq 237 aa
MARRQIVLDTETTGIDPKQGHRIIEIGCVELVNRRLTGNNFHVYINPQRNSEEEAIDVHG
ITNEFLRDKPLFHQIAQEFFDYIKGAELVIHNAPFDIGHMDNEFSLLNQGYPKTATFCQV
LDTLKMARDLHPGQKNNLDALCRRYDVDNAKRTLHGALLDSEILADVYLAMTGGQVKLNL
NQNKNDDTDQQKGGIRRLSAQRAPLVVLSASEAEQAAHEARLDIVNNEGGHCIWRAD
NT seq 714 nt   +upstreamnt  +downstreamnt
atggcacgcagacaaatagttttagatacagaaaccaccggcatcgaccctaaacaaggg
catcgtattatcgaaatagggtgtgttgaattagtaaatcgccgcttaaccggcaataac
tttcatgtgtatattaacccgcagcgcaacagtgaagaagaagcaatagatgttcacggt
atcactaatgagtttttacgtgataaaccattgtttcatcaaattgctcaagagtttttt
gattatattaagggtgcagaactggttattcataatgcgccgttcgatattggccatatg
gataacgaattttctctgcttaaccagggctatcctaaaacggccactttctgtcaagta
ctcgacacgcttaaaatggcgcgtgacttgcatccaggacaaaagaacaacctagatgcg
ctatgccgtcgttacgacgtagataacgctaagcgaaccttgcacggcgcattactggat
tctgaaatattagctgacgtttacctagcaatgactggcggacaagttaagctaaatttg
aatcaaaataaaaatgacgataccgatcagcaaaaaggcggaatacgacgcttaagcgcc
caaagagcacctcttgtagtattaagcgccagtgaggcagaacaagctgcacacgaagca
cgattagatattgttaataatgaaggcggccactgtatatggcgcgctgattaa

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