Pseudoalteromonas nigrifaciens: PNIG_b0571
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Entry
PNIG_b0571 CDS
T05271
Symbol
betA
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00260
Glycine, serine and threonine metabolism
png01100
Metabolic pathways
Module
png_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PNIG_b0571 (betA)
Enzymes [BR:
png01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
PNIG_b0571 (betA)
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
Pyr_redox_3
FAD_binding_2
Pyr_redox_2
Lycopene_cycl
NAD_binding_8
HI0933_like
DAO
ApbA
Thi4
Motif
Other DBs
NCBI-ProteinID:
ASM56135
UniProt:
A0A379I447
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All DBs
Position
II:complement(518710..520377)
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AA seq
555 aa
AA seq
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MSNSYDYIIVGAGSAGCVLANRLSADKNTRVLLLETGGSDKSIFIKMPTALSIPMNSDKY
AWQFHTQPEPHLDNREMHCPRGKVLGGSSSINGMVYVRGHAKDFDEWQHNGANGWDYQSC
LPYFQKAESFYLGENKYRGGKGPLGVNNGNEMKNPLYSTFIKAGIEAGYAHTYDYNASQQ
EGFGPMHMTVKDGVRSSAAREYLDPVKSRSNLTIVTDALAQRVVLEGKKATGIEYKVNGE
VKTAVAAKEVILSAGSIGSPHILQLSGIGDSEVLKKAGIEVKHHLPGVGQNLQDHLEFYF
QYKCKQPITLNGKLGLISKGLIGARWLLTRKGLGATNHFESCAFIRSKPGVEWPDLQYHF
LPAAMRYDGRSAFDGHGFQVHVGHNKPKSRGSVTIASADPEQPPKIVFNYLQHQDDIEGF
RACVRLTREIIEQSAFDDYRDEEIQPGKHIQTDAEIDAFVRQTVESAYHPSCSCKMGEDE
LAVVNSNTQVHGIAGLRVVDSSIFPTIPNGNLNGPTIMVAEKAADIILGNKPLAKLNASV
AMSANWQTTQRNSKI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattcgtatgactatattattgtgggcgcaggctctgcaggttgcgtgttagca
aatcgcttatcggccgataaaaacacccgtgtattactactagaaacgggtggcagtgat
aaaagcatttttataaaaatgcctaccgcgctttctattccaatgaatagcgataagtac
gcgtggcagtttcatacccaacctgagccgcatttagacaaccgagaaatgcattgtccg
cgcggtaaagtactcggtggttcgtcatctattaatggcatggtgtatgtacgcggccat
gcaaaagactttgacgaatggcaacacaatggcgcaaacggctgggattatcagtcttgt
ttaccgtattttcaaaaagcagaaagcttttacttaggtgaaaataagtaccgtggcggt
aaaggcccgctgggcgttaataacggtaacgaaatgaaaaaccctttgtacagcaccttt
attaaagcgggcattgaagcgggttacgcacacacttacgactacaatgcctcgcagcaa
gaaggctttgggccaatgcacatgacggtaaaagacggtgtacgtagctcagccgcgcgt
gaatatttagaccctgttaaatcgcgtagtaatttaactattgttaccgatgcacttgcc
cagcgcgttgttttagagggcaaaaaagccactggtattgaatacaaagtaaatggcgaa
gttaaaaccgctgttgctgcaaaagaagtgatattaagcgccggctctattggctcgcca
catattttacagctatcgggtattggcgatagcgaggtgcttaaaaaagcaggcattgag
gtaaaacaccatttacccggtgtagggcaaaacttacaagatcatcttgagttttacttt
caatataagtgcaaacaacctattaccttaaacggtaaattagggttaatttcaaaaggt
ttaattggtgcacgttggttattaacccgcaagggactgggcgctacaaatcactttgaa
tcatgtgcttttattcgctctaagcctggagttgaatggccggatttgcaataccatttt
ttacctgccgcaatgcgctacgacggacgcagtgcctttgacggccatggctttcaagta
catgtaggtcataacaagccaaaaagccgcggcagcgttactattgcatcggctgatcct
gagcaaccacctaaaattgtgtttaattacctacaacatcaagatgacattgaaggcttt
agagcctgtgtacgcctaactcgtgaaattattgagcaaagtgcctttgatgattatcgc
gatgaagaaattcagccaggtaagcatattcaaaccgatgcagaaatagatgcctttgta
cgtcaaacggttgaaagcgcttatcacccttcttgctcttgcaaaatgggtgaagatgaa
ctggcagtcgttaattcaaacactcaagtacatgggattgcaggtttacgtgtagttgac
tcatctatatttccaaccataccaaacggtaacttaaacggccctaccattatggtggcc
gaaaaagccgctgatattattttaggtaataagccactagcaaaactcaatgcatctgta
gcaatgagcgctaactggcaaacaacacaacgtaatagcaagatataa
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