KEGG   Parastagonospora nodorum: SNOG_04721
Entry
SNOG_04721        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
pno  Parastagonospora nodorum
Pathway
pno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SNOG_04721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pno03021]
    SNOG_04721
   03019 Messenger RNA biogenesis [BR:pno03019]
    SNOG_04721
Transcription machinery [BR:pno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     SNOG_04721
Messenger RNA biogenesis [BR:pno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SNOG_04721
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_4 zf-CCCH_2 zf-CCCH_3
Other DBs
NCBI-GeneID: 5972001
NCBI-ProteinID: XP_001795133
UniProt: Q0UU43
LinkDB
Position
Unknown
AA seq 232 aa
MAEVQARSVSMAPDQDVEKAGQPMYKFNFSEFLSREYRFGLDPNRPACKFLVCKHWLRGL
CKKGETCEFLHEYNLRRMPECSYYARTQTCSNGDDCLYLHIDPEAKRPSCPHYDRGFCPL
GPYCALKHNKKEKLCPFYLCGFCPEGKGCKYGAHARFPTDLKKPEVRIEKSPEELEAERL
ERERAMMRREEEERERDDRGGHGGGRGFRGKWDQNKRGRGRGRGRGRGRGDF
NT seq 699 nt   +upstreamnt  +downstreamnt
atggccgaagtgcaggctcggtcagtctcaatggcacccgaccaggatgtcgagaaggcg
gggcagcccatgtacaagttcaacttcagtgaattcctcagccgcgaatacagatttggt
ctggatcccaacaggccagcatgcaaatttctagtgtgcaagcattggctccgtggcctc
tgcaagaagggcgagacgtgcgaattccttcacgagtacaacctgcgacgaatgcctgaa
tgttcgtactacgcccgcacacaaacatgctccaacggcgacgattgcctctacctccac
attgatcccgaagcaaagcggccttcatgtccgcactacgatcgcggattctgcccactc
ggcccttactgtgcgctaaaacataataagaaggaaaagctatgtccattctacttgtgc
ggattctgtcccgaaggcaagggctgcaagtatggcgcacatgctcgatttcccacagat
ctcaagaagccggaagtccgtatagaaaagagcccagaagagcttgaggcagaacgtctg
gagagggagcgcgcaatgatgaggcgagaagaagaggagcgtgagcgagatgatagaggc
gggcacggcggtggccgagggttcagaggcaaatgggatcaaaacaagcgagggcgtggg
cgagggcgcggccgtggacgtggccgcggggacttctaa

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