Parastagonospora nodorum: SNOG_04721
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Entry
SNOG_04721 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pno
Parastagonospora nodorum
Pathway
pno03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SNOG_04721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pno03021
]
SNOG_04721
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_04721
Transcription machinery [BR:
pno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SNOG_04721
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
SNOG_04721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
5972001
NCBI-ProteinID:
XP_001795133
UniProt:
Q0UU43
LinkDB
All DBs
Position
Unknown
AA seq
232 aa
AA seq
DB search
MAEVQARSVSMAPDQDVEKAGQPMYKFNFSEFLSREYRFGLDPNRPACKFLVCKHWLRGL
CKKGETCEFLHEYNLRRMPECSYYARTQTCSNGDDCLYLHIDPEAKRPSCPHYDRGFCPL
GPYCALKHNKKEKLCPFYLCGFCPEGKGCKYGAHARFPTDLKKPEVRIEKSPEELEAERL
ERERAMMRREEEERERDDRGGHGGGRGFRGKWDQNKRGRGRGRGRGRGRGDF
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtgcaggctcggtcagtctcaatggcacccgaccaggatgtcgagaaggcg
gggcagcccatgtacaagttcaacttcagtgaattcctcagccgcgaatacagatttggt
ctggatcccaacaggccagcatgcaaatttctagtgtgcaagcattggctccgtggcctc
tgcaagaagggcgagacgtgcgaattccttcacgagtacaacctgcgacgaatgcctgaa
tgttcgtactacgcccgcacacaaacatgctccaacggcgacgattgcctctacctccac
attgatcccgaagcaaagcggccttcatgtccgcactacgatcgcggattctgcccactc
ggcccttactgtgcgctaaaacataataagaaggaaaagctatgtccattctacttgtgc
ggattctgtcccgaaggcaagggctgcaagtatggcgcacatgctcgatttcccacagat
ctcaagaagccggaagtccgtatagaaaagagcccagaagagcttgaggcagaacgtctg
gagagggagcgcgcaatgatgaggcgagaagaagaggagcgtgagcgagatgatagaggc
gggcacggcggtggccgagggttcagaggcaaatgggatcaaaacaagcgagggcgtggg
cgagggcgcggccgtggacgtggccgcggggacttctaa
DBGET
integrated database retrieval system