KEGG   Parastagonospora nodorum: SNOG_14590Help
Entry
SNOG_14590        CDS       T01161                                 

Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pno  Parastagonospora nodorum
Pathway
pno03030  DNA replication
pno03410  Base excision repair
pno03420  Nucleotide excision repair
pno03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SNOG_14590
   03410 Base excision repair
    SNOG_14590
   03420 Nucleotide excision repair
    SNOG_14590
   03430 Mismatch repair
    SNOG_14590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pno03032]
    SNOG_14590
   03400 DNA repair and recombination proteins [BR:pno03400]
    SNOG_14590
Enzymes [BR:pno01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SNOG_14590
    6.5.1.6  DNA ligase (ATP or NAD+)
     SNOG_14590
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SNOG_14590
DNA replication proteins [BR:pno03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SNOG_14590
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SNOG_14590
DNA repair and recombination proteins [BR:pno03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SNOG_14590
   NER (nucleotide excision repair)
    Other NER factors
     SNOG_14590
   MMR (mismatch exicision repair)
    Other MMR factors
     SNOG_14590
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 5981697
NCBI-ProteinID: XP_001804772
UniProt: Q0U177
LinkDB All DBs
Position
Unknown
AA seq 869 aa AA seqDB search
MNSPSKRRKKNDGSSQPVRKLEHFFARQTAKAAAKDAPNKADEDQDATTLTDEEYARKLQ
EEWNREDQQQAQATEPVSSNELYEDAERPCVRVTAEEGADTTTAVQRDSLKAEELVEPMP
PKQKNTLTLQSTATEEDTITANIPFDQSPLEFDPIKYIPDLQKHWAVDGGLATYALLTRC
FILINSTTSRIKIVDTLVNLLRTIIEGDPGSLLPAVWLATNAISPPYIDLELGLGGSAIS
KALKKVCGLDNAGLKVLNNKYGDAGDVAFEAKKKQSFTLRKPKPLTIKAVFDSLVKIANS
KGNGSVENKQRIVERLVQDARGAEESRYIVRTLVQHLRIGAVKTTMLIALSRAFMLSEPP
SADFETRGQKELAELKKEELAEIYSRNEEIVKACFARRPNYNDLIPALLEIGVCDELLLR
CGLALHIPLRPMLGSITRDMGEMFTKLQGRDFACEYKYDGQRAQVHCDEKGKVTIFSRHL
EVMTDKYPDLVALVPQIRGEGVSSFILEGEVVAIDRNSGELKTFQTLANRARKDVAIGAV
TIDVCLFAFDLMYLNGEELLNRPFRERRSLLKSLFVEIPHTFTWVKCLDATSADVDAVQA
FFQSALDIKCEGIMVKVLDNLPNPDLLDNTNDLNDKTPSLPPTPKKKKSTKSKSKAKSTD
DGDKDEAKSHGRRKALLSTYEPDKRLDSWLKVKKDYSTTSETLDLIPVGAFHGSGRKAAW
WSPILLAIRNAETGQLEAVTKCMSGFTDAFYKANRAKYDKDDPDCTTVLASKPRYVEYNG
GAGTPDVWFEPQEVWEVAFADLTLSPTYTAAIGLVSEERGLSTRFPRFLKVREDKGIDEA
TEAQELADLYRKQEAKAPRKEGDGEEEGD
NT seq 2610 nt NT seq  +upstreamnt  +downstreamnt
atgaacagcccgtcgaagcgtcggaagaagaacgatgggtccagccaaccggtgcgcaag
ctggaacacttcttcgcaaggcagacagctaaagccgcagccaaagatgcgccaaacaag
gccgatgaagatcaagacgcgacgacgctgaccgacgaggagtatgcaagaaagctgcag
gaagaatggaatcgggaagatcaacagcaggcgcaagcgacagagcctgtgagctccaat
gagctctatgaggatgcagagagaccgtgtgtgcgggtgacggcggaagaaggcgcagac
acgacgaccgcagtacaacgcgactcattgaaagcagaagaattggttgaacccatgccg
ccgaaacagaagaataccttgacgctccagtcgaccgctaccgaagaagatacaatcacc
gccaacataccattcgatcagagtccgctcgaatttgaccccatcaagtacatacccgat
ctacaaaagcactgggcggtggatggaggccttgcgacatatgcgctgttgacgcgatgt
ttcatactcataaatagcaccacaagtcgcataaagattgtagacacgctcgtcaacctt
ttgcgaaccatcatcgagggcgacccgggcagtctgctacctgcggtatggcttgcgacg
aatgcgatatctccaccttacattgatcttgagctaggactcggaggctcagcgatatca
aaagctctcaagaaagtgtgtggcttggacaacgcgggcttgaaagtgctgaacaataaa
tacggagatgcaggagatgtcgcgttcgaagcaaagaaaaagcagtcgttcacgctgcgg
aaaccaaagccgctcacaatcaaggctgtcttcgattcgctggtcaagattgcaaacagt
aagggcaatggaagcgtggagaacaagcagcgcattgtcgagagactggtacaggatgcg
agaggcgccgaagaaagtcgctacattgtgcgcacacttgtgcaacacttgcgcataggc
gcagtcaagactacgatgctgatcgcactgtctcgcgctttcatgttgtcagaacctcca
agcgccgacttcgaaacgcgcgggcaaaaagagcttgcagagctaaagaaagaagagctt
gcagaaatctacagccggaacgaagaaatcgtcaaggcatgtttcgccaggagacctaac
tacaatgacctcatacctgcgttgctcgagattggtgtttgcgatgaactgctacttcga
tgcggactggccttacatattcccctgcgtcccatgttgggtagcattacgcgcgacatg
ggcgagatgttcacgaagctgcagggtcgcgattttgcatgcgagtacaagtacgacggg
caaagagcacaggtgcattgtgacgagaagggcaaagtaaccatcttctcgcgacatctg
gaagtcatgacagacaagtatcctgacctggttgcgctggtaccacaaatacgaggagag
ggcgtgtcgagcttcattcttgagggcgaggtggtcgccattgatcgcaacagcggagag
cttaagacatttcagactcttgcgaatcgtgcaaggaaggatgttgcaattggtgccgtc
actattgatgtgtgcctttttgcctttgacctcatgtacctgaacggcgaagaactgcta
aatcgtccattccgagaaagaagaagcctactcaagagtctgtttgtcgagataccacac
acattcacgtgggtgaagtgcctcgatgccacatctgccgacgtggacgcggtgcaggca
ttcttccaaagcgcgctcgacatcaaatgcgaaggcattatggtcaaagtcctcgacaac
cttcccaacccagacctcctcgacaacacaaatgacttgaatgacaagacaccctcttta
ccacccacacctaaaaagaagaaatccacaaagtccaagtcgaaagcgaaatcgaccgat
gacggcgacaaggacgaagcaaaatcccacggccgccggaaagccctgctctccacctac
gaacctgacaagcgcctcgactcctggctgaaagtaaagaaagactacagtacaacctcg
gaaacgctcgacctcatccccgtcggcgcatttcatggatctgggcgcaaagcggcatgg
tggtctcccatcctgctcgccatccgcaatgccgaaactggccagctcgaagcagttaca
aagtgcatgtctggcttcaccgacgccttctacaaagcgaatcgcgcaaaatacgacaag
gacgacccggattgtacaactgtgctagcgagtaagccgcgttacgtggagtacaatggc
ggcgcgggcacgcccgatgtgtggtttgagccgcaggaggtgtgggaagtggcgtttgcg
gacctgacgctgagtccgacgtatactgcggcgattgggctagtgagtgaggagaggggg
ttgagtacgaggtttcccaggttcttgaaggttagagaggataagggaattgatgaagcg
accgaggcgcaggagctggccgacttgtataggaagcaggaggctaaggcgccgaggaag
gagggcgatggggaggaggagggggattga

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