Pandoraea norimbergensis: AT302_05245
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Entry
AT302_05245 CDS
T04226
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr00470
D-Amino acid metabolism
pnr00550
Peptidoglycan biosynthesis
pnr01100
Metabolic pathways
pnr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AT302_05245
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AT302_05245
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AT302_05245
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnr01011
]
AT302_05245
Enzymes [BR:
pnr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AT302_05245
Peptidoglycan biosynthesis and degradation proteins [BR:
pnr01011
]
Precursor biosynthesis
Amino acid ligase
AT302_05245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATP-grasp_4
ATPgrasp_ST
CPSase_L_D2
TTL
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ALS63060
UniProt:
A0A0U2Y8U3
LinkDB
All DBs
Position
complement(5533175..5534113)
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AA seq
312 aa
AA seq
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MGGRSAERQISLISGNGVLEALRSRGVDAHGFDTGMHDLAALAAQKFDRVFIALHGRYGE
DGTLQGALEHLGIPYTGSGVLASALAMDKEMTKRVWINEGLPTPRFTMLNADSDFDAVAR
DLGLPLIVKPSREGSTIGLTKVTEASQLKAAFEKAVALDPDVLAEEFIDGDELTVPVLGV
GTKGAAAARALPVIRIVAPDANYDYQNKYFKDDTRYECPPPLSVSLQEEVQRIVLRAYLV
LGCRGWARADVMLRKRDNKPYLLEINTSPGMTGHSLVPISARAAGLSYEDLVVEILATAT
LDLHPNAQWKPE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggcggacgctcggccgagcgtcagatctcgctgatttcgggcaatggcgtgctcgaa
gccctgcgctcgcgcggggtggatgcccacggtttcgataccggcatgcatgacctggcc
gcgctggccgcccagaagttcgaccgcgtgttcatcgcgctgcacggccgctacggtgaa
gacggtacgttgcagggcgcgctcgaacatctgggcattccgtacaccggcagcggcgtg
ttggcgtctgcgctggcgatggacaaggaaatgaccaagcgcgtgtggatcaacgaaggg
ctgccgacgccgcgcttcacgatgctcaacgccgacagcgatttcgacgccgtggcgcgc
gatctcggcctgccgctgatcgtgaagccgtcgcgcgaaggttcgaccatcggtctgacg
aaggtcaccgaggcatcgcaactgaaggcggcgttcgagaaggccgtcgcgctcgacccg
gacgtgctcgccgaagagttcatcgatggcgacgagttgaccgtgccggtgctcggtgtg
ggcaccaagggtgccgccgcggcgcgtgcgctgccggtgatccgcatcgttgcgccggat
gcgaactacgactaccagaacaagtatttcaaggacgacacccgctacgagtgcccgccg
ccgttgtcggtctcgttgcaggaagaagtgcagcgcatcgtgttgcgcgcgtacttggtg
ctgggttgccgtggctgggcgcgcgcggacgtgatgctgcgcaagcgcgacaacaagccg
tatctgttggagatcaatacgtcgccggggatgaccggccactcgctggtgccgatttcg
gcgcgggcggcgggcttgtcgtatgaagacctggtggttgaaattctggcaactgcgacg
ctcgatctgcatccgaacgcgcagtggaaacctgagtga
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