KEGG   Pandoraea norimbergensis: AT302_05245
Entry
AT302_05245       CDS       T04226                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
pnr  Pandoraea norimbergensis
Pathway
pnr00470  D-Amino acid metabolism
pnr00550  Peptidoglycan biosynthesis
pnr01100  Metabolic pathways
pnr01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pnr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AT302_05245
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AT302_05245
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    AT302_05245
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pnr01011]
    AT302_05245
Enzymes [BR:pnr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     AT302_05245
Peptidoglycan biosynthesis and degradation proteins [BR:pnr01011]
 Precursor biosynthesis
  Amino acid ligase
   AT302_05245
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp ATP-grasp_4 ATPgrasp_ST CPSase_L_D2 TTL GARS_A
Other DBs
NCBI-ProteinID: ALS63060
UniProt: A0A0U2Y8U3
LinkDB
Position
complement(5533175..5534113)
AA seq 312 aa
MGGRSAERQISLISGNGVLEALRSRGVDAHGFDTGMHDLAALAAQKFDRVFIALHGRYGE
DGTLQGALEHLGIPYTGSGVLASALAMDKEMTKRVWINEGLPTPRFTMLNADSDFDAVAR
DLGLPLIVKPSREGSTIGLTKVTEASQLKAAFEKAVALDPDVLAEEFIDGDELTVPVLGV
GTKGAAAARALPVIRIVAPDANYDYQNKYFKDDTRYECPPPLSVSLQEEVQRIVLRAYLV
LGCRGWARADVMLRKRDNKPYLLEINTSPGMTGHSLVPISARAAGLSYEDLVVEILATAT
LDLHPNAQWKPE
NT seq 939 nt   +upstreamnt  +downstreamnt
atgggcggacgctcggccgagcgtcagatctcgctgatttcgggcaatggcgtgctcgaa
gccctgcgctcgcgcggggtggatgcccacggtttcgataccggcatgcatgacctggcc
gcgctggccgcccagaagttcgaccgcgtgttcatcgcgctgcacggccgctacggtgaa
gacggtacgttgcagggcgcgctcgaacatctgggcattccgtacaccggcagcggcgtg
ttggcgtctgcgctggcgatggacaaggaaatgaccaagcgcgtgtggatcaacgaaggg
ctgccgacgccgcgcttcacgatgctcaacgccgacagcgatttcgacgccgtggcgcgc
gatctcggcctgccgctgatcgtgaagccgtcgcgcgaaggttcgaccatcggtctgacg
aaggtcaccgaggcatcgcaactgaaggcggcgttcgagaaggccgtcgcgctcgacccg
gacgtgctcgccgaagagttcatcgatggcgacgagttgaccgtgccggtgctcggtgtg
ggcaccaagggtgccgccgcggcgcgtgcgctgccggtgatccgcatcgttgcgccggat
gcgaactacgactaccagaacaagtatttcaaggacgacacccgctacgagtgcccgccg
ccgttgtcggtctcgttgcaggaagaagtgcagcgcatcgtgttgcgcgcgtacttggtg
ctgggttgccgtggctgggcgcgcgcggacgtgatgctgcgcaagcgcgacaacaagccg
tatctgttggagatcaatacgtcgccggggatgaccggccactcgctggtgccgatttcg
gcgcgggcggcgggcttgtcgtatgaagacctggtggttgaaattctggcaactgcgacg
ctcgatctgcatccgaacgcgcagtggaaacctgagtga

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